Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3931g00003 ATGGTTCTGTTTGTTGTTCTCTCTCTACCTTGTATCTTTATCTTCGTCTTCTTTGTTATCTCGCAAAAAAGAAAACTTGCAGCACCACCAGGTCCTCCATCTCTTCCTCTCATCGGCAACCTTCACCAACTCCATCACTCATCCCCACATCGCTCCCTATGGCAACTCGCCAAGCGCTACGGCCCTCTCATGTCGCTGCGACTCGCCTCTGTACAAACCCTCGTCGTTTCCTCGGCACAAGTCGCCAAAGAAATCCTCAAAACCCATGACCTCAACTTCGGAACCAGGCCCGCCTTCGTCGGCCCCAGAAAGCTCTCTTACAACGGGCTCGACTTGGGCTTCGCGCCCTACGGCCCATGCTGGAGAGAATTGAAGAAACTCTGCATGATCCACCTCTTCAGCGCGCACCGCGTTCAGTCCTTTCGCTCCGTTCGAGAAGACGAGGTAGCTCAAATGCTTCGGAAGCTCTCTGAGCAAGAAGCTTCGGGCACCGTCGTGAACCTAACCGAAATACTTATGTCTTTCACGAGTTCTCTGATATGCAGAATCGCGTTCGGGAAAAAAAAGTACGTCGACGAGTACGAGGAAGTTGTTGAGAAGGGAAAGCGGAGGAGCCGGTTGCAGGTTATGCTGAACGAGGCGCAGGCGTTGCTGACTGAGTTTTTCTTTTCGGATTATTTTCCGTTGCTGGGTTGGGTTGATTGGTTGACGGGTAAAAGGCAGCGGCTGGAGAAAACGTTCAAGGAGTTGGATGCGTTCTACGAACGAGTGATCTTGGAGCACATGGATTCTGCCATGGGTAAAGACGGTGATGATGAGAAAGAAGTGCAAGATATCATCGATATCTTTCTTCAGCTTCTTCGTGATCGTTCTCTCTCGTTTCATTTCACTGTTGACCACATAAAAGCGGTGCTCATGAACATCTTCATAGCGGGAACAGACCCTCCTTCGGCGACAATAGTTTGGGCGATGACGGCACTGTTGAATAATGGTGAAGTGATGAGAAAGGTTCAAGGAGAAGTGAGAAGTTTATTCGGTGAGAAAGATTTCATAAACGAAGACGACGTTGAAAGGCTTCCATATCTGAAAGCAGTGGTGAAGGAGACGTTGAGACTGTTCCCACCGTCGCCGCTTCTGTTGCCGAGAGAAGCGATAGAGCGTTGCAGCATAGAGGGGTACGAGATTGAAGCCAAAACCTTGGTGTACGTTAACGCCTGGGCTATAGCGAGGGACCCTGAGAACTGGGAAAAGCCCCTTGAGTTTTGTCCCGAGAGGTTTCTCGGGAGTGAGATGGAGTTGAAGGGGAAGGAGTTTGAGGTGCTGCCGTTTGGGAGTGGCCGGAGAATGTGTCCGGCGAAGCACATGGGAATGGTGAACGTTGAGCTCTCTCTTGCGAATCTGCTCCACAGTTTTGACTGGGAAGTGGACCCAGGGAGTGACAGAGAGGACATGTTAGGCACAGAAGTGAAACCAGGAATAACAATGCACAAGAAAACTGACCTTTACCTTGTTCCCAAGAAGAGGACAACCTAG 1533 0.5029 MVLFVVLSLPCIFIFVFFVISQKRKLAAPPGPPSLPLIGNLHQLHHSSPHRSLWQLAKRYGPLMSLRLASVQTLVVSSAQVAKEILKTHDLNFGTRPAFVGPRKLSYNGLDLGFAPYGPCWRELKKLCMIHLFSAHRVQSFRSVREDEVAQMLRKLSEQEASGTVVNLTEILMSFTSSLICRIAFGKKKYVDEYEEVVEKGKRRSRLQVMLNEAQALLTEFFFSDYFPLLGWVDWLTGKRQRLEKTFKELDAFYERVILEHMDSAMGKDGDDEKEVQDIIDIFLQLLRDRSLSFHFTVDHIKAVLMNIFIAGTDPPSATIVWAMTALLNNGEVMRKVQGEVRSLFGEKDFINEDDVERLPYLKAVVKETLRLFPPSPLLLPREAIERCSIEGYEIEAKTLVYVNAWAIARDPENWEKPLEFCPERFLGSEMELKGKEFEVLPFGSGRRMCPAKHMGMVNVELSLANLLHSFDWEVDPGSDREDMLGTEVKPGITMHKKTDLYLVPKKRTT 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3931g00003 510 Gene3D Cytochrome P450 20 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 Pfam Cytochrome P450 29 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Vium3931g00003 510 SUPERFAMILY Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PANTHER CYTOCHROME P450 71B11-RELATED 16 506 - -
Vium3931g00003 510 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3931g00003 510 CDD CYP71-like 59 501 - -
Vium3931g00003 510 FunFam Cytochrome P450 83B1 16 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3931g00003 Vium-Chr3931 27410 29952 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3931g00003 2 507 Cytochrome P450 AT4G31500 44.597 4.45e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3931g00003 - - vun:114192989 882.093