Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3917g00001 ATGGCGGAGCAGAGGAACCGTTGGAGCTGGGACGTCGCCGGCTTCGACCCGTGGAAATCATCTCCGCCGTCGCAATCTCCGCCGCCTCCCCTGGAGCACGCTGATCGGAAACCTACTGCGCCATTGGTGCGGCGTTACTCCATTTCTGCTACGTCGGTTCTTCCGCAACCCAGGCAGTCCGTGGCCTTGAAGCTTCAACGGTTGAAAGACAAAGTCAAGCTTGCTAGAGAAGACTATGTGCAATTAAGACAAGAGGCAAATGAACTTCAAGAATATTCAAATGCAAAACTTGATCGAGTTACACGATATCTAGGTGTTCTTGCAGAGAAAATCCGCAAGCTAGATCATGTAGCCCTTGAAACTGAAGCAAAAATAGCTCCGCTGATCAATGAGAAAAGAAGACTATTCAATGATTTATTAACATCTAAAGGAAACATACGAGTATTCTGCCGAGCAAGGCCATTATTTGAAAATGAAGGTGCTTCAGTTGTTGAATTTCCAAATGACTATACCATTAGTGTAAATACTGGTGATGAATCCTTGTCCAATGCCAAGAAAGACTTTGAATTTGACCGAGTTTATGGACCTCATGTGGGTCAAGCTGAGTTATTTAGTGATGTTCAACCACTGGTACAATCAGCTTTGGATGGATATAATGTTTCCATATTTGCATATGGACAAACACATTCTGGAAAGACACACACTATGGAAGGATCAAGCTATGATCGAGGTTTATATGCTCGTTGTTCTGAGGAGTTGTTTGATTTATCCAATTTAGATTCAACTTCTACTTCTCAATATAAATTCTGTGTTACAGTTTGTGAGCTATATAATGAAGAGACTAGGGATCTACTTTTGGAGGCAGGGAAAAACACTCCTAAACTCAGCTTGGGGTCACCTGAATGTTTTGTGGAACTGGCACAGGAAAAGGTTGACAATCCTGTTGAGTTTTCTGCAGTATTAAAAGCTGCATTGCAGACTCGGGAAAATGATTTGGCAAAGAATAATGTTTCTCATTTGATTGTCACAGTACACATATTTTATAACAATTTGATCACGGGTGAAAACTCATATAGTAAACTCTATATGGTTGATTTAGCTGGAAGTGAAGGTTTAATAACAGAAGATGACAGTGGGGACCGTGTCACAGATTTGCTGCATGTTATGAAGTCTCTTTCAGCGTTGGGAGATGTTTTGTCTTCTTTAACATCAAAGAAGGATATAATACCTTATGAAAATTCAGTGCTAACAAAACTGCTTGCAGATTCACTTGGTATTGATTTTTTCTTCCCTCTTATTATCTTTGATGTCTCTGCTTATTAA 1323 0.4051 MAEQRNRWSWDVAGFDPWKSSPPSQSPPPPLEHADRKPTAPLVRRYSISATSVLPQPRQSVALKLQRLKDKVKLAREDYVQLRQEANELQEYSNAKLDRVTRYLGVLAEKIRKLDHVALETEAKIAPLINEKRRLFNDLLTSKGNIRVFCRARPLFENEGASVVEFPNDYTISVNTGDESLSNAKKDFEFDRVYGPHVGQAELFSDVQPLVQSALDGYNVSIFAYGQTHSGKTHTMEGSSYDRGLYARCSEELFDLSNLDSTSTSQYKFCVTVCELYNEETRDLLLEAGKNTPKLSLGSPECFVELAQEKVDNPVEFSAVLKAALQTRENDLAKNNVSHLIVTVHIFYNNLITGENSYSKLYMVDLAGSEGLITEDDSGDRVTDLLHVMKSLSALGDVLSSLTSKKDIIPYENSVLTKLLADSLGIDFFFPLIIFDVSAY 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3917g00001 440 ProSitePatterns Kinesin motor domain signature. 359 370 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vium3917g00001 440 FunFam kinesin-like protein KIN-14B isoform X1 92 439 - -
Vium3917g00001 440 Coils Coil 58 92 - -
Vium3917g00001 440 PRINTS Kinesin heavy chain signature 360 378 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3917g00001 440 PRINTS Kinesin heavy chain signature 217 238 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3917g00001 440 PRINTS Kinesin heavy chain signature 409 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3917g00001 440 MobiDBLite consensus disorder prediction 21 35 - -
Vium3917g00001 440 Pfam Kinesin motor domain 151 425 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3917g00001 440 ProSiteProfiles Kinesin motor domain profile. 145 440 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3917g00001 440 MobiDBLite consensus disorder prediction 1 39 - -
Vium3917g00001 440 Gene3D Kinesin motor domain 84 435 IPR036961 -
Vium3917g00001 440 PANTHER KINESIN-LIKE PROTEIN KLP-3 61 427 IPR027640 GO:0003777|GO:0007018
Vium3917g00001 440 SMART kinesin_4 143 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3917g00001 440 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 120 429 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3917g00001 Vium-Chr3917 24468 30265 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3917g00001 132 425 Calmodulin-binding Proteins AT5G65930 35.621 2.17e-43 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3917g00001 - - gmx:100796816 754.977