LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium3902g00026	ATGGTATTGCTGGTTGCACTTGCATTGCTTCTGGGTCTCTTCCTCGCTGTTCTTCTTTTCAACCCACGACACCGCAAATCTGGGCACAAGGGAAAAGCTCAAACCAGTTTAAACAATGATAAGACATCAAAATCCTACAGTAAAACGGAAGTTTCATTGCATAACAAGAGAACAGATTGTTGGATAATCATCAAGAAAAAGGTATATGATGTTACCTCTTATGTGGAAGAACATCCAGGTGGTGATGCCATTCTAGCACATGCTGGAGATGATTCAACTGAAGGATTTTTTGGACCACAGCATGCAACTCGAGTCTTTGACATGATTGAAGACTTCTACATTGGAGATTTGGAACAATAG	360	0.4056	MVLLVALALLLGLFLAVLLFNPRHRKSGHKGKAQTSLNNDKTSKSYSKTEVSLHNKRTDCWIIIKKKVYDVTSYVEEHPGGDAILAHAGDDSTEGFFGPQHATRVFDMIEDFYIGDLEQ	119

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium3902g00026	119	FunFam	Sulfite oxidase, mitochondrial	41	119	-	-
	Vium3902g00026	119	PANTHER	CYTOCHROME B5	30	117	-	-
	Vium3902g00026	119	MobiDBLite	consensus disorder prediction	25	44	-	-
	Vium3902g00026	119	SMART	Cyt_b5_2	46	118	IPR001199	-
	Vium3902g00026	119	Pfam	Cytochrome b5-like Heme/Steroid binding domain	48	117	IPR001199	-
	Vium3902g00026	119	SUPERFAMILY	Cytochrome b5-like heme/steroid binding domain	41	118	IPR036400	-
	Vium3902g00026	119	ProSiteProfiles	Cytochrome b5 family, heme-binding domain profile.	43	118	IPR001199	-
	Vium3902g00026	119	PRINTS	Cytochrome B5 signature	105	117	IPR001199	-
	Vium3902g00026	119	PRINTS	Cytochrome B5 signature	68	78	IPR001199	-
	Vium3902g00026	119	PRINTS	Cytochrome B5 signature	78	92	IPR001199	-
	Vium3902g00026	119	ProSitePatterns	Cytochrome b5 family, heme-binding domain signature.	74	81	IPR018506	GO:0020037
	Vium3902g00026	119	Gene3D	-	35	119	IPR036400	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium3902g00026	Vium-Chr3902	194672	196866	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium3902g00026	3	117	NADPH P450 reductases	AT1G60660	61.667	1.10e-50	155

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium3902g00026	-		-	gmx:100527821	213.001