Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium386g00013 ATGTTCAAGACAATGAAGAAGGTGAATGCATTTTGTTTATCACACGTTGTTGTCCATCTCTCAATGCTGTGTTTGCTATGCGAATGTAATTCAAAGGCAGTTACGTATATAGTTCACATGGACAAGTCTTACATGCCCAAAGTTTTCACCTCCCAACGCCATTGGTATTCATCCACCGTTACTTCTCTGGATTCCGCCACTCAAAACGTTAACCGTAGCATTTTGTACTCTTATGAAAACGCACTTCACGGTTTCAGTGTTGCCTTATCACCAAAGCAGTTAGAGAGTCTCAAAGAAACACCAGGTTTCATCTCAGCATACAGAGACAGAGCAGCCATTCTTGACACCACCGCTTCCTACGCCTTCCTCTCTCTCAACGTCTCTCACGGCCTCTGGCCAGCTTCCAACTACGGCCAAAACGTCGTCGTTGGCGTCGTCGATTCCGGAATCTGGCCCGAGAGCGACAGCTTCAAAGACGATGGCATGGTAACTCAAACTCCTCCAAAATGGAAGGGAAAGTGCGAGGGTGGTCAACGCTTTGACCCCTCCCTCTGTAATTCCAAACTCGTAGGCGCAAGGTACTTCAACAAAGGCCTTCTCGCAGCGCAGGACGGTGATGACGACACTAAAATTGGCTCCAACTCCGTTAGAGATAGCGTTGGACACGGGACCCACACCGCGTCCACGGTGGCGGGAAACTACGTGAGGGGCGCGTCGTATTTCGGTTACGCCAAGGGCACCGCAAGAGGAATTGCGCCACGTTCTAAAATTGCGATATACAAGGTTGCGTGGGCCCAAGGCGCGTTTGCCTCGGACATGCTCGCCGGTTTGGACCAGGCAATCGCTGACGGAGTGGACGTTATTTCCATTTCAATGGGTTTGGACATGGTGCCCTTGTACGAGGATCCCGTCGCAATCGCCGCTTTCTCTGCTTTGGAGAAAGGCGTGGTGGTTTCAGCTTCTGCAGGAAACGCAGGTCCGTCACTGGGGTCCATACATAACGGGATTCCGTGGGTTTTAACGGTTGGAGCGAGCAACACAGAGCGCTCTTTTGGCGGCACGTTAATTCTGGGAAACGGGAAGAGATATTCCGGGTGGACTCTGTTCCCAGCAAGTGCCACGGTCAATAACCTTCCTCTGGTTTACCATAAAAACGCTTCCGCATGTGACTCTTCTACACTGTTGTCACAAGTGGCGCGTGGCAGCGTCGTCATATGCGATTCTGTTATGGATGTTAACCAGCAGATTCAGCAAGTGTCACTCTCTTCAGTGTATGGAGCTGTGTTTATATCCAGTGATTCCACTCTCTTTGAAACGGGAAAAATGACGTTTCCGGGCCTTGTTATTAGCCCTCACCATGGTAAAAATGTGATCGAATACGCACGCGCCACTCGATCGGCTTCCGCCACCATAAAGTTTCAAGAAACGTTCGTCGGAACCAAACGGGCTCCCACGGTGGCCAGTTACAGTTCTAGAGGCCCGTCTTGGGAGTGTCCGTGGGTATTGAAGCCTGACGTTATGGCTCCGGGGTCGTCGATTTTGGCGGCTTGGGTTCCGGATTTGCCTGCGGCCCAAATTGGCCCAAACGTGGTGTTAAATAATGAATACAATTTGATGTCTGGGACGTCGATGGCTTGTCCTCATGCTTCCGGGGTGGTGGCTCTGTTGCGGAATGCACACCCCGAGTGGAGTGCTTCGGCTGTTAGGTCCGCGTTGATAACTACGGCCAGCCCACTGGATAACTCTGGAAAGCCCATCGAAGAAAATGGAGAGCTCTCTCCACGGGCTTCTCCTCTCGCAATGGGCGCTGGCCTGATTGACCCCAACCGTGCCCTTGACCCAGGTTTGGTTTATGACGCCACCCCTCAAGACTATGTTAACCTCCTCTGTGCCATGAATTTCACTCAGGCTCAAATCTTGACCATTACCAGATCAAAGGCCTACAATTGCTCCAGCCCATCTTACGACGTCAATTATCCCTCTTTCGTGGCATTTTCTGTTGACCTGAGTGTGACAGTGAAGAGAAAATTCCGGAGAATTGTGACGTACGTTGGAGATGGTCCGGCTACTTACACGGCACGTGTGAGCTCGTCTAATGGCACGCAAATCTCAGTTTCTCCCAATAGGTTGGTCTTCAAGGCAAAATATGAGAAAAGGAAATTCAGTTTGACGTTGAACTCTGAAATGAAGAAGGAAAATGCAATGGCTTTTGGTTCATTGGAATGGGTCGAAGAAACAGGAAGGCACGTTGTTCGGAGTCCTCTTGTGATTGTACCCACCAACTTTGTCTTTAACCCCTAA 2301 0.5041 MFKTMKKVNAFCLSHVVVHLSMLCLLCECNSKAVTYIVHMDKSYMPKVFTSQRHWYSSTVTSLDSATQNVNRSILYSYENALHGFSVALSPKQLESLKETPGFISAYRDRAAILDTTASYAFLSLNVSHGLWPASNYGQNVVVGVVDSGIWPESDSFKDDGMVTQTPPKWKGKCEGGQRFDPSLCNSKLVGARYFNKGLLAAQDGDDDTKIGSNSVRDSVGHGTHTASTVAGNYVRGASYFGYAKGTARGIAPRSKIAIYKVAWAQGAFASDMLAGLDQAIADGVDVISISMGLDMVPLYEDPVAIAAFSALEKGVVVSASAGNAGPSLGSIHNGIPWVLTVGASNTERSFGGTLILGNGKRYSGWTLFPASATVNNLPLVYHKNASACDSSTLLSQVARGSVVICDSVMDVNQQIQQVSLSSVYGAVFISSDSTLFETGKMTFPGLVISPHHGKNVIEYARATRSASATIKFQETFVGTKRAPTVASYSSRGPSWECPWVLKPDVMAPGSSILAAWVPDLPAAQIGPNVVLNNEYNLMSGTSMACPHASGVVALLRNAHPEWSASAVRSALITTASPLDNSGKPIEENGELSPRASPLAMGAGLIDPNRALDPGLVYDATPQDYVNLLCAMNFTQAQILTITRSKAYNCSSPSYDVNYPSFVAFSVDLSVTVKRKFRRIVTYVGDGPATYTARVSSSNGTQISVSPNRLVFKAKYEKRKFSLTLNSEMKKENAMAFGSLEWVEETGRHVVRSPLVIVPTNFVFNP 766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium386g00013 766 Gene3D - 629 759 - -
Vium386g00013 766 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 27 114 IPR037045 -
Vium386g00013 766 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 756 IPR045051 -
Vium386g00013 766 FunFam Subtilisin-like protease SBT1.9 26 115 - -
Vium386g00013 766 Pfam Fibronectin type-III domain 656 757 IPR041469 -
Vium386g00013 766 Gene3D - 348 478 - -
Vium386g00013 766 SUPERFAMILY Subtilisin-like 124 616 IPR036852 GO:0004252|GO:0006508
Vium386g00013 766 FunFam Subtilisin-like protease SBT1.5 140 356 - -
Vium386g00013 766 CDD Peptidases_S8_3 114 577 IPR034197 -
Vium386g00013 766 CDD PA_subtilisin_like 354 471 - -
Vium386g00013 766 Gene3D Peptidase S8/S53 domain 140 625 IPR036852 GO:0004252|GO:0006508
Vium386g00013 766 Pfam Peptidase inhibitor I9 35 110 IPR010259 -
Vium386g00013 766 Pfam Subtilase family 138 580 IPR000209 GO:0006508|GO:0008236
Vium386g00013 766 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
Vium386g00013 766 PRINTS Subtilisin serine protease family (S8) signature 218 231 IPR015500 -
Vium386g00013 766 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Vium386g00013 766 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Vium386g00013 766 ProSiteProfiles Serine proteases, subtilase domain profile. 119 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium386g00013 Vium-Chr386 77591 80082 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium386g00013 22 757 Subtilisin-like Serine Gene Family AT5G67360 42.202 0.0 558
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium386g00013 - - gmx:100791444 1197.19