Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3868g00069 ATGTCGGGGCAAACGCAGCGTCTGAACGTGGTCCCCACCGTCACGATGCTGGGAGTGGTGAAGGCGCGTCTGGTGGGAGCCACGCGAGGCCACGCGCTCCTGAAGAAGAAGAGCGATGCGCTCACGGTGCAGTTCCGCCAGATCCTGAAGAAGATCGTGACCGCAAAGGAGTCCATGGGCGACATCATGAAAACCTCGTCGTTCGCGCTCACTGAGGCCAAGTACGTCGCCGGTGACAATATCAAACACGTGGTCCTGGAGAATGTCCGGGAAGCCTCTCTCCGCGTCCGCTCGCGCCAGGAAAACGTTGCCGGTGTCAAGCTCCCCAAGTTCGAGTACACCTCCGACGCTGACGCCAACAAGAACGACCTCACCGGACTGGCGCGGGGGGGCCAGCAGGTGCAGCAGTGCCGCGCCGCCTACATCAAGGCCATCGAGGTTCTCGTCGAGCTCGCCTCGCTTCAGACCTCGTTCCTCACTCTCGATGAGGCTATCAAGACCACGAACCGTAGGGTTAACGCTCTGGAGAATGTGGTGAAGCCGCGGTTGGAGAATACGATTAGTTACATCAAGGGGGAGTTGGATGAGCTCGAGAGGGAAGATTTCTTCAGGCTGAAGAAGATTCAGGGGTATAAGAAGAGGGAGATTGAGAAGCAGATGTTGTTGAAGAAGGTTGAGTCTAATTTACCTCTGCACAAAGCGGTTTCTTACAATTCCTCTAATCTGTTGGCTGTGGGTGACAAAGATGAGGATATTATCTTCTGA 765 0.5582 MSGQTQRLNVVPTVTMLGVVKARLVGATRGHALLKKKSDALTVQFRQILKKIVTAKESMGDIMKTSSFALTEAKYVAGDNIKHVVLENVREASLRVRSRQENVAGVKLPKFEYTSDADANKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIEKQMLLKKVESNLPLHKAVSYNSSNLLAVGDKDEDIIF 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3868g00069 254 Pfam ATP synthase subunit D 18 209 IPR002699 GO:0046961
Vium3868g00069 254 Coils Coil 180 200 - -
Vium3868g00069 254 Gene3D - 1 199 - -
Vium3868g00069 254 FunFam V-type proton ATPase subunit D 1 199 - -
Vium3868g00069 254 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 254 IPR002699 GO:0046961
Vium3868g00069 254 NCBIfam V-type ATP synthase subunit D 9 213 IPR002699 GO:0046961
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3868g00069 Vium-Chr3868 302735 303986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3868g00069 1 254 Primary Pumps ATPases(2) AT3G58730 76.718 4.38e-144 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3868g00069 K02149 - gmx:100801612 452.981