Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3868g00063 ATGTCTCTAAAGATAGCAGCAGAAGTTTATCCAAAATCACCATCAGAGACAGTGATGGAGCCATTGATTGTGGTAAACGAATATGATGAAGATAGACACAAGGTGGCAGTAGAGAAACTCGAGAGGCTTTGTGAAGTTGGGCAGAGTGGAAAGCCATCTCTTGTCACTGACCTCATGGGAGACCCCATATGCCGTATCCGTCACTTTCAATTGCATGTCATGCTGGTTGCAGAATATGGAGAAGGAGGAGAAGTTGTTGGGGTGATAAGAGGTTGTGTAAAAACAGTTACAAGAGGGAATTCGGTTTATGTAAAACTGGCCTATATTTTGGGGCTCAGAGTCTCCCCTCGACACAGGAGATTTGGCATTGGCACAAAACTAGTCGAACATTTAGAAGAGTGGTGCAAGCAAAAAGGGGCTAAGTATGCATATATGGCAACTGATTGTACCAATGAGCCTTCAGTGAATCTGTTCACAAAAAAATGTGGCTACTCAAAGTTCAGGACTCTAACCATACTGGTGCAACCTGTGCATGCTCACTACAAACCAATCAGCTCCAACGTTGCCGTGCTTCGCCTTCCACCACGCCTTGCAGGCTCCATGTATGACCAGTTGTTTGCCAATTCAGAATTTTACCCTAAAGACAAAGACTCGATCTTGTGCAACAAGCTGAATCTGGGGACTTTCATGGCCATCCCCAAGAAGTACTTCTCCAAGTGTGATCCAAAAAGGGGCATTCTCCCTCCAAGCTATGCCATACTGAGCGTGTGGAACACCAAAGACGTGTTCAAATTGCAAGTAAAGGGTGTGTCACCATTGGCACATGCCTGCTGCGTAGGTACGAGGTTGTTGGATGAATGGATGCCATGGCTAAGGCTACCTTCGTTTCCAGATGTTTTCAGGCCATTTGGGGTTTATTTTTTGTATGGACTGCACATGGAAGGAAAGTGTGGTGCTCAACTGATGAAGTGCTTATGTGCATTTGTGCATAACATGGGAAGAGATGGTGGTGGTTGTGGGGCCATTGTGGCTGAACTGGGCCAAAGGGACCCAGTCAGAGACGTAGTCCCACATTGGAGAAAATTCTCATGGGCAGAGGACATGTGGTGTATAAAGAATCTTCACAAGGGTTCTTCTCAGAACTCTGATTGGTTCACTTCTAGATCCTCTTCGCCAGTTATATTTGTTGATCCTCGAGACTTTTGA 1206 0.4561 MSLKIAAEVYPKSPSETVMEPLIVVNEYDEDRHKVAVEKLERLCEVGQSGKPSLVTDLMGDPICRIRHFQLHVMLVAEYGEGGEVVGVIRGCVKTVTRGNSVYVKLAYILGLRVSPRHRRFGIGTKLVEHLEEWCKQKGAKYAYMATDCTNEPSVNLFTKKCGYSKFRTLTILVQPVHAHYKPISSNVAVLRLPPRLAGSMYDQLFANSEFYPKDKDSILCNKLNLGTFMAIPKKYFSKCDPKRGILPPSYAILSVWNTKDVFKLQVKGVSPLAHACCVGTRLLDEWMPWLRLPSFPDVFRPFGVYFLYGLHMEGKCGAQLMKCLCAFVHNMGRDGGGCGAIVAELGQRDPVRDVVPHWRKFSWAEDMWCIKNLHKGSSQNSDWFTSRSSSPVIFVDPRDF 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3868g00063 401 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 20 401 - -
Vium3868g00063 401 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 70 170 IPR016181 -
Vium3868g00063 401 CDD NAT_SF 74 144 - -
Vium3868g00063 401 Pfam Acetyltransferase (GNAT) family 74 164 IPR000182 GO:0016747
Vium3868g00063 401 FunFam Putative N-acetyltransferase HLS1 38 169 - -
Vium3868g00063 401 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 194 IPR000182 GO:0016747
Vium3868g00063 401 Gene3D - 30 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3868g00063 Vium-Chr3868 268445 270948 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium3868g00063 Acetyltransf_1 2.6e-18 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3868g00063 - - gmx:100802670 765.377