Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3866g00017 ATGGCCACCACCACCAGTCTTGGCGGCGGCGCTGGCGGAGATGACCGCGTCCTAGCCACGGCTCAGCAGATCGTGAAGAGCCTCAGAGCCGCCAAAGAGGATCGCGAAGACATGCTTCTGATCTTCTCCACCTTCGATAACCGACTATCCGGCATCTCCGACCTGATAAACGGCGACGATTCCAAATCCTCCGAAGAGGAAGAACTCGACCGCTTCGAAGCCGCGGAGAAAGTGATTCTCGCCGACGCTTCCCTCTCCGACGAGCCTTCGCGCCAATCCACTTCTCTCTTCAACCCTCCTAACAATCCCGTGGAGTACTTTTCCGCGGTTGATGAGATCATCCACTGGATGGAGCAGTTTTCGATCGCGCCACCCTCCTCCGCCGTGGGACGCACAGGGCCCGCCATCGTGGACCGGGCGGAGAACGCGATTCAACTCGCGATGTCTCGACTGGAGGACGAGATGCGGCACGTGCTGATTTGCAACACGATCCCGCTCGACGCCGTGAGCCGCTACGGTTCGATCAGGAGGGTTTCGCTCTCGTTCGGCTCGCACGACGGTGCCATCGACGATACCCTAGAGAGCTTCGGTGAGGTCGGCTCGAGTCGTTTCCACGAGCGAGGCGCGAGCCTCGGCGACGATTTGTTCGTCGATTTGGTGCGTCCCGAAGCGGTTCAGGATCTCAGGCAAATTATCGATCGCATGGTTAGGTCTGGTTATGAGAGAGAGTGTCTTCAGGTTTATAGCAGTGTCCGTCGCGACGCTCTGGATGAGTGTTTAGTCATTCTGGGTGTTGAGCGGTTGAGTATTGAAGAGGTTCAGAGGGTTGAGTGGAGAAGTTTGGATGAGAAGATGAAGAATTGGGTTCAGGCTGTGAAGGTTGTTGTTGGGGTTTTGTTGAGTGGTGAGAAGTGGCTGTGTGATGGTTTGTTTGGGGATTTGGATGACTTGAAGGAGATTTGTTTCAATGAGACTGCTAAGGGGTGTATTATGCAGTTACTGAATTTCGGCGAGGCTATTTCGATTTGTAAGCGCTCGCCAGAGAAGCTGTTTCGGATTTTGGACATGTATGAGGCTCTGAGGGATGCCATGCCTGATTTGCAGGCTATGGTTTCGGATGAGTTTGTGATTGGTGAGGCCAATGGAGTGCTGAGTGGACTTGGTGAGGCTGCTAAAGGGACTTTTGCTGAGTTTGAGAATTGTATTAGGACTGAAACTTCCAAAAAACCAGTTATAACTGGGGATGTTCACCCTTTGCCTCGTTATGTCATGAATTACCTCAAGTTGCTTGTGGATTATGGTGACCCTATGGATTCGCTTCTGGAGATTAGCGAGGAGGATCTCCATCGGTTTAAAAATGATCTTGGTGGTGATGGTTCGCAGTTGGAGGCCATGTCACCCTTGGGGCAGCGGATTCTGTTGCTCATGTCTGAGCTTGAGTATAATCTTGAGGAGAAGTCGAGGCTGTATGAAGATAGTGCTATGCAGCAGGTGTTTTTGATGAACAATCTGTATTACCTAGTGCGGAAAGTGAAGGACTCGGATCTTGGGAAGGTCTTGGGGGATAATTGGATTCGGAAACGACGTGGTCAGATACGGCAGTATGCTACAGGGTATCTCAGAGCCTCTTGGAGCAGGGCCTTGTCTTGTTTGAAGGATGAAGGGATTGGAGGGAGCTCTAATAATGCGTCGAAGATGGCTTTGAAGGAGAGATTCAAAAGCTTCAATGCCTGCTTTGAAGAAATTTATAGGGTTCAGACTGCTTGGAAGGTACCGGACGATCAACTTCGAGAGGAGCTGCGGATATCTATATCGGAGAAGGTGATTCCTGCATATCGCTCTTTTGTGGGTAGATTTAGGAGTCAGCTAGAGGGAAGGCATGCGGGGAAATACATCAAGTATACACCAGAGGATCTAGAGACCTATCTATTAGATTTATTTGAAGGATCCCCTGCTGTATTGCATCACATAAGGAGGAAAAGTACATAG 1989 0.5078 MATTTSLGGGAGGDDRVLATAQQIVKSLRAAKEDREDMLLIFSTFDNRLSGISDLINGDDSKSSEEEELDRFEAAEKVILADASLSDEPSRQSTSLFNPPNNPVEYFSAVDEIIHWMEQFSIAPPSSAVGRTGPAIVDRAENAIQLAMSRLEDEMRHVLICNTIPLDAVSRYGSIRRVSLSFGSHDGAIDDTLESFGEVGSSRFHERGASLGDDLFVDLVRPEAVQDLRQIIDRMVRSGYERECLQVYSSVRRDALDECLVILGVERLSIEEVQRVEWRSLDEKMKNWVQAVKVVVGVLLSGEKWLCDGLFGDLDDLKEICFNETAKGCIMQLLNFGEAISICKRSPEKLFRILDMYEALRDAMPDLQAMVSDEFVIGEANGVLSGLGEAAKGTFAEFENCIRTETSKKPVITGDVHPLPRYVMNYLKLLVDYGDPMDSLLEISEEDLHRFKNDLGGDGSQLEAMSPLGQRILLLMSELEYNLEEKSRLYEDSAMQQVFLMNNLYYLVRKVKDSDLGKVLGDNWIRKRRGQIRQYATGYLRASWSRALSCLKDEGIGGSSNNASKMALKERFKSFNACFEEIYRVQTAWKVPDDQLREELRISISEKVIPAYRSFVGRFRSQLEGRHAGKYIKYTPEDLETYLLDLFEGSPAVLHHIRRKST 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3866g00017 662 PANTHER EXOCYST COMPLEX PROTEIN EXO70 66 649 IPR004140 GO:0000145|GO:0006887
Vium3866g00017 662 Coils Coil 137 157 - -
Vium3866g00017 662 Gene3D Exocyst complex component Exo70 90 654 - -
Vium3866g00017 662 Pfam Exo70 exocyst complex subunit 286 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vium3866g00017 662 SUPERFAMILY Cullin repeat-like 91 648 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3866g00017 Vium-Chr3866 84351 86863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3866g00017 15 661 EXO70 exocyst subunit family AT5G50380 59.735 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3866g00017 K07195 - gmx:100818693 1194.49