Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium384g00008 ATGGCTTCTCGCAATCCCAGCAATAAAAGGGTGGGCCCCGAAGAAGCTTCTCTGGACAAGCGTCGCAGGGGCACCGGAGCTGAGAAAATGGAGCGACAGGGCGGTCCGACTGCTGCTGGGAGGCCTAGAACGCCGTTTTCCGTTGTCACAAATCGCTCAGACCTTAACACAACGAGTGATGTTACCGATGCGGTTGATTTCACGAAGGAGGAGGTGGAGGCTTTGCTGAATGAAAAGAAGAAGGGAAATACCTATGATAGTAAGAAAAAGATGGAGCAGATGACGGATCTCATTAAGCGCCTTAAGGCCTGCGTTCGCTGGTATAAAAGGATAGAAGAAGGGTATGTTCAAGAAAAGGAAAAGCTTCAGTCTGAGCTAGAGGCTTCTGAGAAGAAGTGCAGTGATACTGAGACTGAGATGAAGAATAAGATTGATGAGTTGGAGGAGACTCTATCTGATTCGAGGAGGAAAATTTCTTGTCTAGAAGAGAGAATTGTGAAGGAAGAATCAGATAAATTGGAAGCGATTAATTCTTATGGTAAAGAAAAGGAAGTCAGAACTAAAGCTGAGAAAGTACGGGATGAGAAGTCAGCTGAGCTTGAGAAAGTTCGGGATGAGAAATCAGTTGCTGAGAAGAAGGCCATTTCAAATGAAGATTTGTACAAGCGATCACAGGAGTATAATATGAGTTTGCAGCAGTACAATAGTCGTCTTCAGTTTGATCTTGAAACAGTTAATGAGGCCCTTAAACGGCTTGAAACTGAGAAAGCAGCCATTGTTGAGAGCCTTAGCAATTTAAGAGGCCACAATAAGGCATTGCAGGATCAGTTGGTATCTCTTAAAGTTTCACAGGACGAGGCTATAAAGCAGAAAGAAATTTTATCAAATGAGCTCAAATGTGTTCGTGAGGAGTTAAAGCAACTTAGAGATGACCGTGACCGTCAGTTGGAGCAAGTACATGCCCTATCCGGAGAAATAGCGAGGCACAAAGAATATACTGGGAAAACATGTACACAATTGGATACGTTGATGATTAAAACAAATGCTCTTGAGGAAACTTGTTCATCTCAAAAGGATCAAATACACATACTGCAGCAGCAGTTGTTTGCGGAAAGAGAGAAGTTAAAGACTGCTGATCTATCAGCTTCTGAAACAAGAACAATGTTTGAAGAGCAGAAGAGGATTATACAGGGGCTACAGGAGCGTTTGGCAGATAAAGAATTTCAAGTAGTAGAAGGAGAGAAGTTAAGAAAAAAACTGCATAACACTATTTTGGAACTAAAAGGAAATATTCGTGTTTTCTGCCGTGTACGGCCGCTCCTACCGGATGACAGTGCGGACACGGTTGTTTCATTCCCTACTTCAACAGAAGCGCTTGGTCGGGGCATTGAATTGGTGCAAAGCGGGCAGAAGTACAATTTCACATTTGACAAGGTGTTCAATCACGAGGCTTCTCAGCAGGACGTTTTTGTAGAGATATCACAGCTGGTACAAAGTGCACTTGATGGCTACAAGGTGTGCATCTTTGCATATGGACATACGGGCTCAGGTAAAACCTATACTATGATGGGTAGGCCTGATGAGCCAGATCTGAAAGGGTTGATACCCCGTTCTTTAGAACAGATATTTCAGACTAGCCAGTCTCTAAAAGACCAAGGGTGGAGGTACACAATGCAGGCATCAATACTGGAAATATATAATGAGACCATCAGGGATTTGTTATTAACAAATCGGTCAAGTGATCATGCACGAACGGAAAATAGTGCCTCCAGCAAGCAGTACACTATCAAACATGATGCAAATGGAAACACACATGTTTCGGACCTCACAATAAAGGATGTTTGTAGCGCAGATGAGATTTCCTCCCTCCTAAGACAGGCAGCACAAAGCAGGTCAGTGGGAAGAACACAAATGAATGAACAGTCATCCAGAAGCCATTTTGTCTTTACACTGCGTATAAGTGGGAAAAATGAGAACACTGAACAACAAGTCCAAGGTGTCTTAAACCTTATCGATCTTGCTGGAAGTGAAAGACTCTCAAGGAGTGGGGCAACTGGAGACCGGTTGAAGGAAACTCAGGCTATCAACAAAAGTCTATCGAGTTTGAGCGATGTCATATTTGCCTTGGGAGGAAAGAAAGAAGATCATGTTCCTTTTAGGAATTCAAAGCTGACGTATCTTCTCCAGCCATGTCTCGGTGGCGACTCCAAAACGTTGATGTTTGTCAACATCTCACCTGATCAATCTTCCACTGGCGAGTCACTTTGTTCCCTCCGCTTTGCAGCCAGAGTCAATGCCTGCGAAATTGGGATTCCAAGGCGTCAGACTCATACATCATCATCGTCATCACGCTCCTCAGAATCCCGTTTGAGCTATGGTTAA 2382 0.437 MASRNPSNKRVGPEEASLDKRRRGTGAEKMERQGGPTAAGRPRTPFSVVTNRSDLNTTSDVTDAVDFTKEEVEALLNEKKKGNTYDSKKKMEQMTDLIKRLKACVRWYKRIEEGYVQEKEKLQSELEASEKKCSDTETEMKNKIDELEETLSDSRRKISCLEERIVKEESDKLEAINSYGKEKEVRTKAEKVRDEKSAELEKVRDEKSVAEKKAISNEDLYKRSQEYNMSLQQYNSRLQFDLETVNEALKRLETEKAAIVESLSNLRGHNKALQDQLVSLKVSQDEAIKQKEILSNELKCVREELKQLRDDRDRQLEQVHALSGEIARHKEYTGKTCTQLDTLMIKTNALEETCSSQKDQIHILQQQLFAEREKLKTADLSASETRTMFEEQKRIIQGLQERLADKEFQVVEGEKLRKKLHNTILELKGNIRVFCRVRPLLPDDSADTVVSFPTSTEALGRGIELVQSGQKYNFTFDKVFNHEASQQDVFVEISQLVQSALDGYKVCIFAYGHTGSGKTYTMMGRPDEPDLKGLIPRSLEQIFQTSQSLKDQGWRYTMQASILEIYNETIRDLLLTNRSSDHARTENSASSKQYTIKHDANGNTHVSDLTIKDVCSADEISSLLRQAAQSRSVGRTQMNEQSSRSHFVFTLRISGKNENTEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALGGKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDQSSTGESLCSLRFAARVNACEIGIPRRQTHTSSSSSRSSESRLSYG 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium384g00008 793 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 389 765 IPR027417 -
Vium384g00008 793 PANTHER KINESIN-LIKE PROTEIN KLP-3 284 779 IPR027640 GO:0003777|GO:0007018
Vium384g00008 793 MobiDBLite consensus disorder prediction 580 599 - -
Vium384g00008 793 MobiDBLite consensus disorder prediction 13 29 - -
Vium384g00008 793 Coils Coil 284 325 - -
Vium384g00008 793 Coils Coil 112 171 - -
Vium384g00008 793 ProSiteProfiles Kinesin motor domain profile. 430 767 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium384g00008 793 Coils Coil 186 213 - -
Vium384g00008 793 SMART kinesin_4 428 775 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium384g00008 793 PRINTS Kinesin heavy chain signature 717 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium384g00008 793 PRINTS Kinesin heavy chain signature 636 653 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium384g00008 793 PRINTS Kinesin heavy chain signature 503 524 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium384g00008 793 PRINTS Kinesin heavy chain signature 667 685 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium384g00008 793 Pfam Kinesin motor domain 436 765 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium384g00008 793 Coils Coil 235 262 - -
Vium384g00008 793 ProSitePatterns Kinesin motor domain signature. 666 677 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vium384g00008 793 FunFam Kinesin-like protein 376 769 - -
Vium384g00008 793 MobiDBLite consensus disorder prediction 773 793 - -
Vium384g00008 793 CDD KISc_C_terminal 428 769 - -
Vium384g00008 793 Gene3D Kinesin motor domain 371 769 IPR036961 -
Vium384g00008 793 MobiDBLite consensus disorder prediction 1 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium384g00008 Vium-Chr384 49192 60652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium384g00008 396 764 Calmodulin-binding Proteins AT5G65930 40.379 2.02e-76 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium384g00008 K10405 - gmx:100818140 1237.25