Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium384g00004 ATGGCTGAGTCCCTATGGAAGAAGATGTACGCGTTTAACGAGGATCGTCTCGACAAGCCTCGTCGTTTCGGCGTCACCGAGATTCCAATCCCCAATTTCAGTCCTTTCTCCCACAACCTTCTTCAGGATATTTTTGAATCTAGAGGGGAATATGTTGATGGGTTGAAGTTATCCGGAGATTCTTACAGCTTGATGCCAAAGGCTACTATCAAGCAAGTGATTGACCTAGCCCATCAGCACGGCGTTTATGTTAGTACTGGTGTTTGGGACGAGCACGTGATTCCGAAAACTCCATCAGATTTCAAAGAATACGTGGAGGAATGCAAGCAGTTGGGGTTTGACACAATTGAGCTTAATGCTGGTTCACTCGGGATTCCTGAAGAAACCTTTCTGAGATTTGTTCGCTTGGTCAAAAGTGCTGGTCTGAAAGCTAGACCTCATTTTCAAGTGAGGTTTAACGAGTCTGATATTCCCAAAGGTGGTGATAGGGCCTATGGAGCTTATATTCCCCCAGAACCTAGATCATCTGAATTTGTAGAAGATGTGGACCTCTTAATCAGAAAGGCTGAGAGATGTCTAAAAGAAGATGCGGACATGATAATGATTGATGCTTTGGGTGTTAGCCAACATGCTGATAAGATGCGTGGAGATATTGTTGCCAAGATCATAGGGCGCCTTGGTCTTGAGAAGACTATGTTTGAAGCATCAAATCAGAGAATCTCTGAGTGGTTCATCAGACAATATAGTCCAAAGGTGAACCTCTGCATTGATCATTCGCATGTGCTGGACGTGGAATGCATCAGAGGACGCAACTCGGGTAGCAATCATGCTTTTGTCTTTGGCCCTTCATCGTTTTCTGTTCTAAAGTGA 870 0.4448 MAESLWKKMYAFNEDRLDKPRRFGVTEIPIPNFSPFSHNLLQDIFESRGEYVDGLKLSGDSYSLMPKATIKQVIDLAHQHGVYVSTGVWDEHVIPKTPSDFKEYVEECKQLGFDTIELNAGSLGIPEETFLRFVRLVKSAGLKARPHFQVRFNESDIPKGGDRAYGAYIPPEPRSSEFVEDVDLLIRKAERCLKEDADMIMIDALGVSQHADKMRGDIVAKIIGRLGLEKTMFEASNQRISEWFIRQYSPKVNLCIDHSHVLDVECIRGRNSGSNHAFVFGPSSFSVLK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium384g00004 289 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 14 268 IPR036112 -
Vium384g00004 289 Gene3D Aldolase class I 9 276 IPR013785 -
Vium384g00004 289 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 15 271 IPR003830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium384g00004 Vium-Chr384 22161 28695 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium384g00004 1 285 Subtilisin-like Serine Gene Family AT4G21320 62.456 9.04e-133 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium384g00004 - - gmx:100805668 437.573