Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium384g00003 ATGATAATGATTGATGCTTTGGGTGTTAGCCAACATGCTGATAAGATGCGTGGAGATATTGTTGCCAAGATCATAGGGCGCCTTGGTCTTGAGAAGACTATGTTTGAAGCATCAAATCAGAGAATCTCTGAGTGGTTCATCAGACAATATAGTCCAAAGGTGAACCTCTGCATTGATCATTCGCATGTGCTGGACGTGGAATGCATCAGAGGACGCAACTCGGGTAGCAATCATGCTTTTGTCTTTGGCCCTTCATCGTTTTCTGTTCTAAAGTGA 276 0.4348 MIMIDALGVSQHADKMRGDIVAKIIGRLGLEKTMFEASNQRISEWFIRQYSPKVNLCIDHSHVLDVECIRGRNSGSNHAFVFGPSSFSVLK 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium384g00003 91 Pfam (2R)-phospho-3-sulfolactate synthase (ComA) 1 73 IPR003830 -
Vium384g00003 91 SUPERFAMILY (2r)-phospho-3-sulfolactate synthase ComA 1 70 IPR036112 -
Vium384g00003 91 Gene3D Aldolase class I 1 78 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium384g00003 Vium-Chr384 17440 18349 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium384g00003 2 87 Subtilisin-like Serine Gene Family AT4G21320 56.977 3.86e-33 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium384g00003 - - vum:124837656 186.037