Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3848g00002 ATGGGGAACATTTATCTGGTACATTTGACGGTGGTGGTGGTGGTTTTCCTGGGGGTGTTTTTACCTTGTTTGTGTCAAGGGGATTCAGACGATGATACCACTGCTGTGTATGTTGTTACCCTTAGACATGCTCCTGTTTCTCATTACTATGGTGAGTTGAGAAGAGAAGTTAGTAGCTTCAAAGATGCTGCTCCTGCTCCAGGGAGAACCCAATTTAACAAACCAAGAAGGTATGACAATATTACTAAGACAGATAAGAGATATGGCTCTTACATTTCCCAAGTTCATGATTCTCTGTTGAAGAAAGTGTTAAACGGAGAGAAATATCTGAAGCTCTATAGCTACCATTACCTGATAAATGGATTCGCTGTGCTGGTTACCCAGAAACAGGTATGA 396 0.4141 MGNIYLVHLTVVVVVFLGVFLPCLCQGDSDDDTTAVYVVTLRHAPVSHYYGELRREVSSFKDAAPAPGRTQFNKPRRYDNITKTDKRYGSYISQVHDSLLKKVLNGEKYLKLYSYHYLINGFAVLVTQKQV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3848g00002 131 Pfam Peptidase inhibitor I9 36 131 IPR010259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3848g00002 Vium-Chr3848 5925 6905 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3848g00002 1 130 Subtilisin-like Serine Gene Family AT4G20430 40.146 5.09e-24 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3848g00002 - - vum:124835789 259.996