Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3847g00001 ATGGCTTCTGAGCACAACATGTTCCATGAAGAAGATGGAAAGGATGAAGCTGGAAGAAGCAGAAGCAGGAGTAGGAGGACAAATGGGAAGGGTCCAAAGAAGCCACCCCAGAGAGGTTTGGGTGTGGCTCAGTTAGAAAGGTTGAGGATTCAAGAGTCTTGGAAGAAGATGAGTGAAGGCTCTTCTGGAGTACTACCACCAGTAACTACCCTCCATGATCATCATCATCATCATCCACAACAACTTTTTCAGCGCCACCCATCACCAAACCTTGGCTTTCAGTTTCAGTGCCATCAACAACATGTGATCAGTGGAAACAGCACTATTGGTGGGAGCTGGATAGTTCCTAACAGGGTTGTTGGTAATGGTTCCTATGGATCTGGTCCTCCACTTTTAGTTGGAACCCCTCTCGAGACCTCGAAAGAGCTCTCTTCAATTCCAAATCTCCATTCTCAACCTGAATGTTTTGATTTTTGCCTAAAGAAAACACGATTCAATGAAGACAATGAAAAGGGATCAAATGCAAGGAGGGAGAGGACTTTAGAGATATGGCCCAATGGCCATGATTTTCTAGGATTTATGCCCCAATCTTCTGTCTCAAGCCTTGTTGGGGAAACCGGTGATTTCTATGACAAACTGGCCAGGCATGATTCTGCTAGTGCTTATGCTTGTGCAACTCCCAATGATGAGAATGTAGAGGTTGTTGCGGTTCACAGGAGGGGAAACTCAGCGAGTGGCAGGGTTTTCATGGAATATGAGTTTTTCCCAGGAAAAGATGGCAGAGGCACTACTCCCAAGGAGCTGGAATTGCCCACAATAGGTTCAGTTGGTGTAGGTGGTGGTGAAGCTTCTTCTATCACTGCTGCAGCCTATGGAGATTCTGCTTCTAATTATATTGATTTGTCTCTGAAGCTCTCACGCTAG 924 0.4578 MASEHNMFHEEDGKDEAGRSRSRSRRTNGKGPKKPPQRGLGVAQLERLRIQESWKKMSEGSSGVLPPVTTLHDHHHHHPQQLFQRHPSPNLGFQFQCHQQHVISGNSTIGGSWIVPNRVVGNGSYGSGPPLLVGTPLETSKELSSIPNLHSQPECFDFCLKKTRFNEDNEKGSNARRERTLEIWPNGHDFLGFMPQSSVSSLVGETGDFYDKLARHDSASAYACATPNDENVEVVAVHRRGNSASGRVFMEYEFFPGKDGRGTTPKELELPTIGSVGVGGGEASSITAAAYGDSASNYIDLSLKLSR 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3847g00001 307 PANTHER OS01G0212500 PROTEIN 1 305 IPR040356 GO:0003700
Vium3847g00001 307 MobiDBLite consensus disorder prediction 1 23 - -
Vium3847g00001 307 Pfam Plant transcription factor NOZZLE 18 263 IPR014855 GO:0003700
Vium3847g00001 307 MobiDBLite consensus disorder prediction 1 83 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NOZZLE Vium3847g00001 NOZZLE 3.4e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3847g00001 - - lang:109348179 258.455