Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3846g00008 ATGGGAAAGGGCGAAGAAGAACGGCAGCCTCTGCCTCCGTCCGAGGATCCTCCGAGGAATGCGGAGTGTCGGTGCCACTGTTCTCGGATTCGGACGTTTGTCGGCGCCAGATGCATCATCATACTGGTCCTGTCGGTCGCGTTGTTCCTATCTGCGGCGTTTTGGTTGCCCCCTTTTATGAGCCTCGCAGATCGGAGGAGCCTGCATGGAGGTTCCAGATTCAAAGATCATGATATTGTTGCCAGCTTTATCGTCAATAAATCTGTTTCTTTGCTAGAAGATTACAAGTTCCAGCTTGCAGATGAAATTTTTGATGAGATTGATGCTCCCTCTAGCAAAGTAGCTGTCGTTTCTCTAGAATCCTTACCTGGGCCAAACAAGACAAGAGTTGTTTTTGCAGTTGATTCTGAAGATAAAGGCACAGAAATGTCCTATCCTGTCATCAGTTTGATAAGAGCATCATTTACATCCCTGGTTATACGCCAATCAATTCTGCAGCTTACTTCTTCATCCTTGTTTGGAGATCCCTACTCTTTTGAAGTGCTGAAACTGAAGGGAGGAATTACTATAATTCCACAACAGAATGCATTTCCTCTACAGAAAGGGCAAGCAAAGTTTAGCTTTAAATTGAATTTTCCCATTTATCAAATACAATCCAATTTTAAGGAGCTCACCAGTCAGTTAAAGTCTGGATTATATCTGACATCCTTTGAGAACTTGTACATCAGCTTATCAAATTCTGATGGTTCAACAGTCGATGCTCCTACTCTTGTCCAGTCAACAGTTCTACTTGCAGTTGGGATTACTTCAAAAGAGAGGCTAAAGAAACTGGCACAAACCATCATGGGACCACATAATCTGGGCTTGAATCACACTGAATTTGGTAGGGTTAAGCAGGTCCAACTTTCATCCGTCTTGCAACACTCCCTTCATGGAAATGATGGTAGTGGCTCTGCGTGGTCACCTTCTCCTGCTCCTCTGGCACATCCTCCACACCACCACCACCATCGACACCGGCATCATCATCATCATCATCACCATGATACCCATCTTTCTCCTGAAATTTCTCCTTTACCCTCATCAACACCAGTACCAGTACCGGTACCAGCACCAGCATCAGCACCAACACCTACACCAACACCTACAGCTAGACATGCACATACTCATGCACATACTCATGCACATTCACCCACACCTATGCCTGTATCTACACCCAGGAAGGGTGTGCCTCCACCCAAGGTTGGTTCTCCTACCGCTGCAAAAGTTGCACCTGCACCATGGAAAAATTCTCAATCTCAGCCTCCTAATTGTCGATTTGGTTTTAGAAAAAGGTCTACCCATAATTCTGGGAAGCATGCTCATCCTCCAACACCTGCAGTTGCCCCTATTATTAACACACATCATCCTGTTCCTGTTGCATCACCAAAATCGTATATCGATCCCCCTACACACGTCTCTCATTCAGAACCTGCATTGAGTCCTTTGCCGAATGTAGCTTTTGCTCATGCTGAGCCCCCTCCTAAGAATGAACTTGCCCCAGAACATTATTACACGCATTTTCCTGGGCTTTCATCATCTTCTGCAGGTTGTCTTGGAACTGCTAAATGGTCAATTTTAATGCTTATAGTACTTGTGTTACGGGTATAA 1647 0.4511 MGKGEEERQPLPPSEDPPRNAECRCHCSRIRTFVGARCIIILVLSVALFLSAAFWLPPFMSLADRRSLHGGSRFKDHDIVASFIVNKSVSLLEDYKFQLADEIFDEIDAPSSKVAVVSLESLPGPNKTRVVFAVDSEDKGTEMSYPVISLIRASFTSLVIRQSILQLTSSSLFGDPYSFEVLKLKGGITIIPQQNAFPLQKGQAKFSFKLNFPIYQIQSNFKELTSQLKSGLYLTSFENLYISLSNSDGSTVDAPTLVQSTVLLAVGITSKERLKKLAQTIMGPHNLGLNHTEFGRVKQVQLSSVLQHSLHGNDGSGSAWSPSPAPLAHPPHHHHHRHRHHHHHHHHDTHLSPEISPLPSSTPVPVPVPAPASAPTPTPTPTARHAHTHAHTHAHSPTPMPVSTPRKGVPPPKVGSPTAAKVAPAPWKNSQSQPPNCRFGFRKRSTHNSGKHAHPPTPAVAPIINTHHPVPVASPKSYIDPPTHVSHSEPALSPLPNVAFAHAEPPPKNELAPEHYYTHFPGLSSSSAGCLGTAKWSILMLIVLVLRV 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3846g00008 548 MobiDBLite consensus disorder prediction 425 443 - -
Vium3846g00008 548 MobiDBLite consensus disorder prediction 329 348 - -
Vium3846g00008 548 MobiDBLite consensus disorder prediction 358 378 - -
Vium3846g00008 548 PANTHER F20B24.21 1 365 - -
Vium3846g00008 548 MobiDBLite consensus disorder prediction 309 457 - -
Vium3846g00008 548 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3846g00008 Vium-Chr3846 111720 116674 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3846g00008 19 306 C3H Transcription Factor Family AT3G10810 52.234 6.05e-77 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3846g00008 - - vum:124835776 960.288