Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3843g00001 ATGCAGCTATATCATCATCCGTTGGATTTGGACAGCCAGAGGGTGAGAATTTCATTGGAGGAGGAGGGTGTGGATTATACATCTCACCATGTAAATCCCATAACTGGCAAGAACTTGGATTCTTCTTTCTTCAAGATGAATCGCCGTGGAAGGGTCCCTGTTTTCCAAAATGGTTCTCATATCATTTACAACACTATTGATATAATCCAGTACATAGAAAGAATTGCTGTGGTTTCCTCAGGGGCTGAGAGTATCAGTACCAGTAACAGGGAAGTGATTGAATGGATGCAGAGGATACAAGACTGGGACCCCAAGTTTTTCACACTTGCACATATACCAGAGAAATACCGTGTTTATGTTTCCAAGTTCATAAGGCAAGTGGTGATTGCTCGCATGTCTGAGTCACCTGAATT 413 0.4237 MQLYHHPLDLDSQRVRISLEEEGVDYTSHHVNPITGKNLDSSFFKMNRRGRVPVFQNGSHIIYNTIDIIQYIERIAVVSSGAESISTSNREVIEWMQRIQDWDPKFFTLAHIPEKYRVYVSKFIRQVVIARMSESPE 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3843g00001 137 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 80 IPR004045 -
Vium3843g00001 137 Pfam Glutathione S-transferase, N-terminal domain 1 74 IPR004045 -
Vium3843g00001 137 PANTHER GLUTATHIONE S-TRANSFERASE TCHQD 1 137 IPR044617 GO:0004364
Vium3843g00001 137 CDD GST_N_family 1 73 - -
Vium3843g00001 137 Gene3D Glutaredoxin 1 75 - -
Vium3843g00001 137 SUPERFAMILY Thioredoxin-like 1 74 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3843g00001 Vium-Chr3843 4 1874 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3843g00001 1 137 Glutathione S-transferase Gene Family AT1G77290 67.153 8.57e-68 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3843g00001 K22077 - gmx:100808461 257.684