Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3835g00041 ATGGCATTTTGGGTGGCCCTGTTACCTCGTTGGTCGGTGTTTCTTCTCATGCTTCTTTTCTTTTGTAGCACAGGAGCAAAGGTTGTCACCATTGATGTGCGTGCAGCCAAGGATCTTATCCAGACTGGTTCCATTTATCTTGATGTTAGGACGGTGGAAGAGTTCTCGAAGGGTTATGTAGATGCAGTTAATATCGTTAACATTCCATACATGTTGAATACACCAAAGGGCAAGGTAATGAATCCAGATTTTGTGAAAGAGGTTTCCTTGGCTTGTAACAAAGAAGATCATATCATTGTGGGTTGTCAAATTGGGGGGAGATCTTTCTATGCAACTGCTGCTCTTCTGTCAGATGGTTTTAAGAATGTGAAGGACATGGGAGGAGGTTATAAGGAATGGGTTATAAACAAGTTCCCAGTGAAGATACCAGCAGCCAAAGAGGAGTTATAA 450 0.4222 MAFWVALLPRWSVFLLMLLFFCSTGAKVVTIDVRAAKDLIQTGSIYLDVRTVEEFSKGYVDAVNIVNIPYMLNTPKGKVMNPDFVKEVSLACNKEDHIIVGCQIGGRSFYATAALLSDGFKNVKDMGGGYKEWVINKFPVKIPAAKEEL 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3835g00041 149 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 27 140 IPR036873 -
Vium3835g00041 149 Gene3D - 22 142 IPR036873 -
Vium3835g00041 149 Pfam Rhodanese-like domain 36 134 IPR001763 -
Vium3835g00041 149 ProSiteProfiles Rhodanese domain profile. 45 142 IPR001763 -
Vium3835g00041 149 SMART rhod_4 31 139 IPR001763 -
Vium3835g00041 149 PANTHER THIOSULFATE SULFURTRANSFERASE 18 23 146 IPR044684 GO:0003824
Vium3835g00041 149 CDD RHOD 36 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3835g00041 Vium-Chr3835 235055 236450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3835g00041 27 140 Sulfurtransferasese or Rhodanese AT5G66170 52.632 1.57e-42 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3835g00041 - K15692 gmx:100815122 242.276