Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3835g00040 ATGGGGGAAGAAAATGGCGAAGGAAGATCCTTAGCTGACACCCCCACCTATGCCGTGGCAACTGTGATCACTGTCCTTGTTTCTTTTAGTTTCTTGTTTCAGGGCACGTTAAAAAAACTGGTGAAGTGGTTGGACAGAACCAAGAGAAAATCTCTGCTTTCTGCTCTGGAAAAGATCAAAGAAGAATTGATGCTTTTTGGGCTTCTGTCATTGCTGATGGGTCATTGGATTATTTTTGTGGCAAAGATTTGCGTTAAGTCATCGGTAATAAGCAGCAGATTTTTTCCGTGCCCATTGGAAAAGAATTCTGTGAAACGTGTGGTCTGGTTGAGTTCAGAATATTCAAATAGAACAGTTGTCAAAGGGCAAGTGAACAATGGCTTGCGAAATTATTGCCCTGAGGGTCACGAATCATTGGCTTCTTATGAAAGTCTTGAGCAGCTTCATCGCTTTGTGTTTGTTCTTGGGGTCACCCATGTTACCTATAGCTTTCTTGCTGTTGCCCTGGCCATGATCAAGAGGATATTCAGATATATAGCTGGAGAACATGGGAAAACGAAGCAAAGACTATTGCTGTACAAAGCATTCAAGCTATGCTTCAGCCGCCAATTTTGGAGTTCTATTCACCGAGCTGATTACATGGCATTGCGCTTAGGCTTCATTACTAACCATGATCTTCCCACAACATACGATTTCCACAACTATATGCTTCGAAGCATGGATGAGGAATTTCGTGACATAGTTGGAGTTAGCGTACTTCTCTGGGTATATGCCATCTGCTGTATTTTCCTAAATTTTCATGGTAGCAACTTTTACTTTTGGCTTTCCTTCGTTCCAGCAATATTGATCCTTATTATTGGTACTAAATTGCATCGAGTGGTAGTAAAGTTGGCTGTCGAAATAATAAATCGTTGCCCAAATATGAAACCTCACCAATTTAACTTAAGAGATGAGCTCTTTTGGTTTGGAAAGCCCAGGTTCCTATTACGGTTAATTCAATTGATTTCCTTCTTGGTAAGTAATATTGTGTTTCCATTTTGCTTTTTCATTGCCGATACACTTACATTCTTTCTCCCTGTTGTAATATTTCAGAATGCATTTGAAATGGCTACATTCCTATGGTCTTTGTGGGAAATTAAAGATCCTTCTTGCTTCATGAACAACCGAACCTTTATTGTGATACGCTTGTCATTCGGGGTCATCTCCCAAGTCTGGTGTAGCTTTATAACGTTTCCTCTGTACGTTATCATAACACAGATGGGCTCAAGGTTCAAGAAGACCGTGGTCTCTGAAAATGTGAGAAAATCACTCTCTAAATGGCAGAGAAGAGTGAAGGAGAGACAAAGTTATTCTTCTGCACTCCTTACTGCAACATCAGCAGCATCGATAAGTTCTTTTATCAGTGGAAACGAGCGTGGCTTAATCAGTGAGGAAGGAAGCTCCTCAGGGACTAAAGATATTTGTCTCTCTTATCTTGATCATGTGTCAAGGACTCAAGCAGATGCATCATTTCCAAGCTATGAAAATGATCCTCATGATATAATCCATGATTCGTCTCCTCCATTGTCTTGA 1572 0.4052 MGEENGEGRSLADTPTYAVATVITVLVSFSFLFQGTLKKLVKWLDRTKRKSLLSALEKIKEELMLFGLLSLLMGHWIIFVAKICVKSSVISSRFFPCPLEKNSVKRVVWLSSEYSNRTVVKGQVNNGLRNYCPEGHESLASYESLEQLHRFVFVLGVTHVTYSFLAVALAMIKRIFRYIAGEHGKTKQRLLLYKAFKLCFSRQFWSSIHRADYMALRLGFITNHDLPTTYDFHNYMLRSMDEEFRDIVGVSVLLWVYAICCIFLNFHGSNFYFWLSFVPAILILIIGTKLHRVVVKLAVEIINRCPNMKPHQFNLRDELFWFGKPRFLLRLIQLISFLVSNIVFPFCFFIADTLTFFLPVVIFQNAFEMATFLWSLWEIKDPSCFMNNRTFIVIRLSFGVISQVWCSFITFPLYVIITQMGSRFKKTVVSENVRKSLSKWQRRVKERQSYSSALLTATSAASISSFISGNERGLISEEGSSSGTKDICLSYLDHVSRTQADASFPSYENDPHDIIHDSSPPLS 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3835g00040 523 PANTHER MLO-LIKE PROTEIN 1 7 462 IPR004326 GO:0006952|GO:0016020
Vium3835g00040 523 MobiDBLite consensus disorder prediction 502 523 - -
Vium3835g00040 523 Pfam Mlo family 196 347 IPR004326 GO:0006952|GO:0016020
Vium3835g00040 523 Pfam Mlo family 351 459 IPR004326 GO:0006952|GO:0016020
Vium3835g00040 523 Pfam Mlo family 9 173 IPR004326 GO:0006952|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3835g00040 Vium-Chr3835 230057 234921 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3835g00040 7 512 MLO family AT1G11000 42.752 4.00e-129 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3835g00040 K08472 - gmx:100807014 807.749