LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium3835g00039	ATGGGGGAAGAAAATGGCGAAGGAAGATCCTTAGCTGACACCCCCACCTATGCCGTGGCAACTGTGATCACTGTCCTTGTTTCTTTTAGTTTCTTGTTTCAGGGCACGTTAAAAAAACTGGTGAAGTGGTTGGACAGAACCAAGAGAAAATCTCTGCTTTCTGCTCTGGAAAAGATCAAAGAAGAATTGATGCTTTTTGGGCTTCTGTCATTGCTGATGGGTCATTGGATTATTTTTGTGGCAAAGATTTGCGTTAAGTCATCGGTAATAAGCAGCAGATTTTTTCCGTGCCCATTGGAAAAGAATTCTGTGAAACGTGTGGTCTGGTTGAGTTCAGAATATTCAAATAGAACAGTTGTCAAAGGGCAAGTGAACAATGGCTTGCGAAATTATTGCCCTGAGGGTCACGAATCATTGGCTTCTTATGAAAGTCTTGAGCAGCTTCATCGCTTTGTGTTTGTTCTTGGGGTCACCCATGTTACCTATAGCTTTCTTGCTGTTGCCCTGGCCATGATCAAGATATATAGCTGGAGAACATGGGAAAACGAAGCAAAGACTATTGCTGTACAAAGCATTCAAGATACTTCACAAAGTACATCAAGCATAAGATTGAGGCGGCTTAATACATTCATCTTTCACCATACATCACATCCTTGGAGTCATCACAAAATTCTTGTTTGGCTGCTATGCTTCAGCCGCCAATTTTGGAGTTCTATTCACCGAGCTGATTACATGGCATTGCGCTTAGGCTTCATTACTAACCATGATCTTCCCACAACATACGATTTCCACAACTATATGCTTCGAAGCATGGATGAGGAATTTCGTGACATAGTTGGAGTTAGCGTACTTCTCTGGGTATATGCCATCTGCTGTATTTTCCTAAATTTTCATGGTAGCAACTTTTACTTTTGGCTTTCCTTCGTTCCAGCAATATTGATCCTTATTATTGGTACTAAATTGCATCGAGTGGTAGTAAAGTTGGCTGTCGAAATAATAAATCGTTGCCCAAATATGAAACCTCACCAATTTAACTTAAGAGATGAGCTCTTTTGGTTTGGAAAGCCCAGGTTCCTATTACGGTTAATTCAATTGATTTCCTTCTTGAATGCATTTGAAATGGCTACATTCCTATGGTCTTTGTGGGAAATTAAAGATCCTTCTTGCTTCATGAACAACCGAACCTTTATTGTGATACGCTTGTCATTCGGGGTCATCTCCCAAGTCTGGTGTAGCTTTATAACGTTTCCTCTGTACGTTATCATAACACAGATGGGCTCAAGGTTCAAGAAGACCGTGGTCTCTGAAAATGTGAGAAAATCACTCTCTAAATGGCAGAGAAGAGTGAAGGAGAGACAAAGTTATTCTTCTGCACTCCTTACTGCAACATCAGCAGCATCGATAAGTTCTTTTATCAGTGGAAACGAGCGTGGCTTAATCAGTGAGGAAGGAAGCTCCTCAGGGACTAAAGATATTTGTCTCTCTTATCTTGATCATGTGTCAAGGACTCAAGCAGATGCATCATTTCCAAGCTATGAAAATGATCCTCATGATATAATCCATGATTCGTCTCCTCCATTGTCTTGA	1587	0.4077	MGEENGEGRSLADTPTYAVATVITVLVSFSFLFQGTLKKLVKWLDRTKRKSLLSALEKIKEELMLFGLLSLLMGHWIIFVAKICVKSSVISSRFFPCPLEKNSVKRVVWLSSEYSNRTVVKGQVNNGLRNYCPEGHESLASYESLEQLHRFVFVLGVTHVTYSFLAVALAMIKIYSWRTWENEAKTIAVQSIQDTSQSTSSIRLRRLNTFIFHHTSHPWSHHKILVWLLCFSRQFWSSIHRADYMALRLGFITNHDLPTTYDFHNYMLRSMDEEFRDIVGVSVLLWVYAICCIFLNFHGSNFYFWLSFVPAILILIIGTKLHRVVVKLAVEIINRCPNMKPHQFNLRDELFWFGKPRFLLRLIQLISFLNAFEMATFLWSLWEIKDPSCFMNNRTFIVIRLSFGVISQVWCSFITFPLYVIITQMGSRFKKTVVSENVRKSLSKWQRRVKERQSYSSALLTATSAASISSFISGNERGLISEEGSSSGTKDICLSYLDHVSRTQADASFPSYENDPHDIIHDSSPPLS	528

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium3835g00039	528	Pfam	Mlo family	9	464	IPR004326	GO:0006952\|GO:0016020
	Vium3835g00039	528	PANTHER	MLO-LIKE PROTEIN 1	7	467	IPR004326	GO:0006952\|GO:0016020
	Vium3835g00039	528	MobiDBLite	consensus disorder prediction	507	528	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium3835g00039	Vium-Chr3835	230057	234921	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium3835g00039	7	517	MLO family	AT1G11000	48.077	1.58e-158	462