Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3835g00008 ATGGCTACCATGGTTGCTTTCTTGAACTTGATCATCATACTTTCAGTAGTCTCTACCGGAAAGTCACTGAGCTTAAACTACTATGAAAATACATGCCCTAAAGTGGAGTGCATTGTTGCCAAGGCAGTGAAGGATGCCACTGCTAAGGACAAAACTGTTCCAGCAGCACTTCTTCGAATGCACTTCCATGATTGTTTCATTAGGGGGTGTGATGCCTCCGTGCTGCTAAATTCAAAAGGAAACAGCAAAGCAGAAAAAGATGGGCCACCAAACGTTTCTTTGCATGCATTCTATGTCATTGATGCAGCAAAGAAAGCACTAGAAGCTGCATGCCCTGGTGTCGTCTCTTGTGCTGATATCCTATCTCTAGCAGCAAGGGACGCAGTTTTTCTGTCTGGAGGACCTACATGGGATGTTCCTAAAGGAAGAAAGGATGGAAGAACATCTAAGGCCAGTGAAACCATACAGTTACCAGCTCCAACCTTCAACTTATCACAATTGCGGCAGAGCTTCTCTCGAAGAGGACTGTCTGGGGAAGACTTGGTAGCTCTGTCAGGGGGGCATACTTTGGGTTTCTCTCATTGCTCATCTTTCAAGAGCAGACTTCACAGCTTTAATGCTACACATGATGTTGATCCTTCATTAAATCCGTCATTTGTAGAAAAACTGAAATCAATTTGTCCACTAAAAAATCAGGCAAAAAATGCAGGCACCACTATGGATCCTTCTTCAGTAACTTTCGACAATACATATTACAGGTTGATCCTCCAACATAAAGGCTTGTTTTCTTCTGATCAAGCTTTGCTCGATAACCCAGATACCAAGAATCTGGTTACGAAGTTTGCCACCTCACAAAAGGCATTTTATCAGGCTTTCGCAAAGTCCATGATCAAAATGAGTAACATCAACGGGGGCCAAGAGGTTAGGAAGGACTGCAGAGTGATCAATTAA 951 0.4322 MATMVAFLNLIIILSVVSTGKSLSLNYYENTCPKVECIVAKAVKDATAKDKTVPAALLRMHFHDCFIRGCDASVLLNSKGNSKAEKDGPPNVSLHAFYVIDAAKKALEAACPGVVSCADILSLAARDAVFLSGGPTWDVPKGRKDGRTSKASETIQLPAPTFNLSQLRQSFSRRGLSGEDLVALSGGHTLGFSHCSSFKSRLHSFNATHDVDPSLNPSFVEKLKSICPLKNQAKNAGTTMDPSSVTFDNTYYRLILQHKGLFSSDQALLDNPDTKNLVTKFATSQKAFYQAFAKSMIKMSNINGGQEVRKDCRVIN 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3835g00008 316 SUPERFAMILY Heme-dependent peroxidases 23 316 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Vium3835g00008 316 Gene3D Peroxidase, domain 2 158 299 - -
Vium3835g00008 316 ProSiteProfiles Plant heme peroxidase family profile. 22 316 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 Pfam Peroxidase 39 284 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 Gene3D - 26 316 - -
Vium3835g00008 316 FunFam Peroxidase 26 170 - -
Vium3835g00008 316 CDD secretory_peroxidase 23 315 IPR033905 GO:0004601|GO:0042744
Vium3835g00008 316 PANTHER PEROXIDASE 25-RELATED 12 304 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 FunFam Peroxidase 158 299 - -
Vium3835g00008 316 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Plant peroxidase signature 254 271 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Plant peroxidase signature 238 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Haem peroxidase superfamily signature 240 255 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vium3835g00008 316 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3835g00008 Vium-Chr3835 35733 37202 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3835g00008 10 315 Peroxidase AT5G42180 67.208 1.11e-155 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3835g00008 K00430 - gmx:102665908 575.089