Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium37g00001 ATGGGTGATCTTCCCAAAGGCGTGGAATCCACGGAATCACTTCACATCACTATGCTTCGAAATATCCTCGGCAGCAAATTTACAGCAGACGTTTTGGTACATAGCTACAAGAAGAGTTTAAATGGTTTTGTCGCAAAGCTAACAGAAGAAGAAGCAGCGAGAATGGCAGGATTGGATGATGTTGTTTCTGTTTTCCCAAACAAAAGGAATGAAGTGCAGACAACAAGGTCTTGGGATTTCGTAGGTTTATCTCAGTCTGCGAAGAGAACAAGCAAAGAGAGTGACATAATTGTCGGAGTAATAGATACTGGAATTTGGCCAGAATCTCGTAGTTTTGATGATCAAGGATTTGGTCCACCTCCATCAAAATGGAAGGGCACTTGCCATAACTTCAGCTGCAACAAGTACAATACATTTTCTTTTCCCCTTCCAAGAGAACTTGGAGCTAAATATTTTCGTACGAAGGATTCGTATGAAGAAGAGTTGAGTCCAAGGGATTCAAATGGGCATGGCACTCATTGTGCATCCACTGCCGCTGGAAACTCAGTTGAGTTCGCAAGTTTCTTGGGCCTTGCGTCAGGAACAGCAAGAGGAGGAGTTCCATCAGCACGCATTGCTGTGTACAAAGTTTGTTGGTCATCTGGTTACTGTGATGATGCAGACATCCTTCAAGCATTTGTTGAAGCAATTGAAGATGGTGTTGACATCATTTCCATTTCAATTGGACCTGCCAATGTAGAACACTACAACTATTTCACTGATGTATATGCCATTGGGGCTTTCTATGCTATGAAGAAAGGTATATTAACGTCTACTTCAGCTGGTAACAGCGGTCCAGAGTATTATACAACATCCAAAAATGCACCATGGGCACTTTCTGTAGCTGCTAGCACTACAGACAGAAAGTTTTTAACCAGTGTTCAGTTGGGTGATGGCAGAACTTATCAGGGATTTTCAGTTAATATATTTGATTACGTGAGCTATCCATTAATTTATGCTGGAAATGCACCAAACATCATCGATAGATACAACAGTTCCATATTCAGGTTATGCCAGGAAAATTCCTTAGACGAGAATTTGGTGAAAGGAAAAATTGTTTCGTGTGATGATTTCCAACAATCTTCATGTGTGAGATCGGTTTCTGGGGCAGCTGGTATTTTATTTAGAAGTTTAGGGCCAAACGATGTCGTTTTTACATATGCATTGCCACCGGTTCTCCTTCGTCGCATTGATGGGGCTCGCATACATTCATACATAAGTCGATCAAGTAAAATAGTTGGAGCTAAATATTTTCGTACGAAGGATTCGTATGAAGAAGAGTTGAGTCCAAGGGATTCAAATGGGCATGGCACTCATTGTGCATCCACTGCCGCTGGAAACTCAGTTGAGTTCGCAAGTTTCTTGGGCCTTGCGTCAGGAACAGCAAGAGGAGGAGTTCCATCAGCACGCATTGCTGTGTACAAAGTTTGTTGGTCATCTGGTTACTGTGATGATGCAGACATCCTTCAAGCATTTGTTGAAGCAATTGAAGATGGTGTTGACATCATTTCCATTTCAATTGGACCTGCCAATGTAGAACACTACAACTATTTCACTGATGTATATGCCATTGGGGCTTTCTATGCTATGAAGAAAGGTATATTAACGTCTACTTCAGCTGGTAACAGCGGTCCAGAGTATTATACAACATCCAAAAATGCACCATGGGCACTTTCTGTAGCTGCTAGCACTACAGACAGAAAGTTTTTAACCAGTGTTCAGTTGGGTGATGGCAGAACTTATCAGGGATTTTCAGTTAATATATTTGATTACGTGAGCTATCCATTAATTTATGCTGGAAATGCACCAAACATCATCGATAGATACAACAGTTCCATATTCAGGTTATGCCAGGAAAATTCCTTAGACGAGAATTTGGTGAAAGGAAAAATTGTTTCGTGTGATGATTTCCAACAATCTTCATGTGTGAGATCGGTTTATGGGGCAGCTGGTATTTTATTTAGAAGTTTAGGGCCAAACGATGTCGTTTTTACATATGCATTGCCACCGGTTCTCCTTCGTCGCATTGATGGGGCTCGCATACATTCATACATAAGTCGATCAAGAAATCCAACTGTTACAATATTTAAGACTTATCAAGATCCAGACTCAATAGCCCTTTACATAGCTCCATTCTCATCTAGAGGACCAAATGCAGTCACTCAAAACATTCTTAAGCCAGATTTAGCTGCCCCTGGGGTTGACATTTTAGCTGCGAGTCCTCCAATTTCATTTGATTCTAATGTCGGAGGAGATATTAGAATTGCAGAGTATAATATAATGTCTGGAACTTCAATGGCATGCCCTCATGCTACTGCAGCAGCAGCTTATATCAAATCGTTTTATCCTGATTGGTCCCCTGCTGCAATCAAATCAGCATTGATGACCACAGCTACCCCAATGAGTAAAAAACTCAATCATGAAGGTGAATTTGCTTATGGTGCTGGCCAAATCAACCCTATGAAGGCACTGAATCCTGGGTTAGTTTATGATGCAAATGAAATTGATTATGTTAACTTTCTATGCGGCGAAGGATATGATACCAAAAAGCTACGAACTATTACAAAGGATGATAGCAGCTGTACACAACAACCTAATAATGGAATGGTTTTGAATCTTAATCTCCCATCTTTTGCCCTTTCCATGAGCACTTCAACACCTTTTAGTAGCACTTTTCACCGAACCGTTACCAATGTTGGAGCCAACACATCAACATACAAAGCTAGGCTAAATGTACCTCCGTCTTCGTTAAAGTTGAAAGTAGAGCCAGACGTTATGTCCTTCTCATATGTGGGTCAAAAGAAGTCCTTCAATCTTGTGATTGAAGGAACACTTAACGAGGTTACAGTTTCGTGTTCTTTGATTTGGGATGATGGAACTTTTCAAGTAAGGAGCCCTATTGTTGTGTTCGATCCACAAATGTAA 2964 0.4086 MGDLPKGVESTESLHITMLRNILGSKFTADVLVHSYKKSLNGFVAKLTEEEAARMAGLDDVVSVFPNKRNEVQTTRSWDFVGLSQSAKRTSKESDIIVGVIDTGIWPESRSFDDQGFGPPPSKWKGTCHNFSCNKYNTFSFPLPRELGAKYFRTKDSYEEELSPRDSNGHGTHCASTAAGNSVEFASFLGLASGTARGGVPSARIAVYKVCWSSGYCDDADILQAFVEAIEDGVDIISISIGPANVEHYNYFTDVYAIGAFYAMKKGILTSTSAGNSGPEYYTTSKNAPWALSVAASTTDRKFLTSVQLGDGRTYQGFSVNIFDYVSYPLIYAGNAPNIIDRYNSSIFRLCQENSLDENLVKGKIVSCDDFQQSSCVRSVSGAAGILFRSLGPNDVVFTYALPPVLLRRIDGARIHSYISRSSKIVGAKYFRTKDSYEEELSPRDSNGHGTHCASTAAGNSVEFASFLGLASGTARGGVPSARIAVYKVCWSSGYCDDADILQAFVEAIEDGVDIISISIGPANVEHYNYFTDVYAIGAFYAMKKGILTSTSAGNSGPEYYTTSKNAPWALSVAASTTDRKFLTSVQLGDGRTYQGFSVNIFDYVSYPLIYAGNAPNIIDRYNSSIFRLCQENSLDENLVKGKIVSCDDFQQSSCVRSVYGAAGILFRSLGPNDVVFTYALPPVLLRRIDGARIHSYISRSRNPTVTIFKTYQDPDSIALYIAPFSSRGPNAVTQNILKPDLAAPGVDILAASPPISFDSNVGGDIRIAEYNIMSGTSMACPHATAAAAYIKSFYPDWSPAAIKSALMTTATPMSKKLNHEGEFAYGAGQINPMKALNPGLVYDANEIDYVNFLCGEGYDTKKLRTITKDDSSCTQQPNNGMVLNLNLPSFALSMSTSTPFSSTFHRTVTNVGANTSTYKARLNVPPSSLKLKVEPDVMSFSYVGQKKSFNLVIEGTLNEVTVSCSLIWDDGTFQVRSPIVVFDPQM 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium37g00001 987 Gene3D Peptidase S8/S53 domain 74 326 IPR036852 GO:0004252|GO:0006508
Vium37g00001 987 Gene3D - 579 715 - -
Vium37g00001 987 ProSitePatterns Serine proteases, subtilase family, histidine active site. 170 180 IPR022398 -
Vium37g00001 987 Pfam Peptidase inhibitor I9 9 69 IPR010259 -
Vium37g00001 987 SUPERFAMILY Subtilisin-like 434 841 IPR036852 GO:0004252|GO:0006508
Vium37g00001 987 CDD Peptidases_S8_3 71 298 IPR034197 -
Vium37g00001 987 Pfam Subtilase family 434 829 IPR000209 GO:0006508|GO:0008236
Vium37g00001 987 Gene3D Peptidase S8/S53 domain 423 850 IPR036852 GO:0004252|GO:0006508
Vium37g00001 987 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 423 982 IPR045051 -
Vium37g00001 987 Pfam Subtilase family 94 302 IPR000209 GO:0006508|GO:0008236
Vium37g00001 987 ProSiteProfiles Serine proteases, subtilase domain profile. 77 837 - -
Vium37g00001 987 ProSitePatterns Serine proteases, subtilase family, histidine active site. 449 459 IPR022398 -
Vium37g00001 987 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 1 72 IPR037045 -
Vium37g00001 987 PRINTS Subtilisin serine protease family (S8) signature 93 112 IPR015500 -
Vium37g00001 987 PRINTS Subtilisin serine protease family (S8) signature 166 179 IPR015500 -
Vium37g00001 987 Pfam Fibronectin type-III domain 885 982 IPR041469 -
Vium37g00001 987 Gene3D - 854 984 - -
Vium37g00001 987 CDD PA_subtilisin_like 306 424 - -
Vium37g00001 987 ProSitePatterns Serine proteases, subtilase family, serine active site. 776 786 IPR023828 -
Vium37g00001 987 CDD PA_subtilisin_like 585 708 - -
Vium37g00001 987 SUPERFAMILY Subtilisin-like 79 330 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium37g00001 Vium-Chr37 8810 16615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium37g00001 422 983 Subtilisin-like Serine Gene Family AT5G59100 44.503 9.09e-151 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium37g00001 - - vum:124825568 1979.53