Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium379g00009 ATGAGCGATCAATCCATTCAAATCCAAATGCTCGCTGAAAAATTCAACCGTTTCGTTCTTGACTACGAACTCAAGCAACCGTCGATAACTTCTGAGCCAGATGATGTATCGAAGCAAGTGAACGAGAACTCAGACTCCGTGGATGAAAACAGTATGTCACAGGGAATCCACGAAGTTTCTCCGGATAAAGGTCATACACTTCCCATATTGAAGAAAATACTTGATCTCGATACTAAAATTCAGGATTTGAAGAAGCATCATATATCATTGTCTGATGAAGTGAAGCTCACGATTGAATCTTTTCCGGGCACTGATGTTTTGAAGTCCGTGCAGCTTCTCGGTGCTGAATATGAACTCTTGAAAAGAAAGTACCTGGAGGAGTCCTCTGAGCGAAGACGGCTTTACAATGAAGTAATTGAACTCAAGGGGAATATCAGAGTTTTCTGCAGATGCAGACCATTAAATGCGAGTGAAATTGCTAATGGGTCTGCTTCTGTTGTCAATTTTGAGTCGTCTTCAGATAATGAGCTTCAAGTCATTTGTGCAGAATCTTCTAAAAAGCAATTTAAATTCGACCATGTATTTGGGCCAGAAGATAACCAAGAGGCTGTTTTTCAACAGACCAAACCCATTGTTACATCAGTATTGGATGGGTACAATGTCTGCATTTTTGCCTATGGGCAAACTGGAACTGGGAAAACATTCACTATGGAAGGAACACCAGAACACAGGGGAGTTAACTACCGAACCCTGGAAGAGTTATTTCGGATAACTGATGAGAGAAATGGCACAATGAAGTATAAATTATCTGTCAGCATGCTGGAGGTTTACAATGAGAAGATAAGAGATCTGTTGGTGGAAAATTCAACTCAACCTACAAAGAAATTGGAGATAAAGCAAGCTGCCGAAGGAACCCAAGATGTCCCTGGACTTATTGAAGCTCGTGTTTATGGAACAGAAGACGTGTGGGAAATGCTTAAGACTGGAAATCGAGTCAGATCAGTTGGATCCACCTGCGCTAATGAGCTTAGTAGCCGTTCGCACTGCTTGTTGCGAGTAACTGTAATGGGGGAAAATTTAATTAATGGCCAGAGAACAAAGAGTCACCTTTGGCTAGTAGACTTAGCTGGCAGTGAGCGAGTGGGAAAAACTGAAGCTGAGGGAGAAAGACTGAAGGAATCTCAATTCATAAATAAGTCTCTTTCAGCGCTTGGTGATGTTATTTCTGCCCTTGCTTCTAAATCAGCCCACATTCCATACAGGAACTCAAAACTCACTCATATGCTGCAAAGCTCGTTAGGTGGAGACTGCAAAACGTTAATGTTTGTGCAGGTAAGTCCAAGCGCAGCAGACTTGGGAGAGACACTTTGCTCACTGAATTTCGCAACCCGCGTCCGTGGAATCGAGGGTGGCCCAGCTCGCAAGCAAGTAGACCACACTGAGCTGTTTAAGTACAAGCAAATGGTAGAAAAGCTCAAACAAGACGAGAAGGAAACAAATAAACTACAGGATAGCTTGCAAATTGCTCAACTCAGGCTTGCTACAAGAGAACAGCATTGTAGAACCCTTCAAGAAAAGGTTCGGGACCTGGAGAACCAGATCAACGAAGAAAGAAAGCACAGACTAAAGCAAGAAAGTAGAGCACTTGCTGCTGTTTCGGCTCAACCTTCATTATCGTCACAACAGACAACAGCTCAGAACAGGAAGCCACCACTGAATCCTTCCAAACTCAGACAACCACTGAGAAAAATAACCAATTCCATGCCTCCACAGTCTCCTCGGAGATCAAAGAATTACACCACATTCATGAATGGAAAGGAAAACTCTGTGAGAAGGGCTTCAATGGCGACCAATTCCGTGAGGCAAGCTGCGCCATCGACAACAGGGCAGTTCTTTCAGGCAAGGAGGAGGGTATCCATTGCCGTGAGACCACCACCTTCAACATCAACAACGCAGGTTATTCAGCCAAGGAGGAGGGTCTCCATTGCCACACTACATCCTCACACAACTTCTGGCATGTCAACTCCACTTCGTACCTCAGCATTCCGAGTTACCGGTGGAAGCAATCAGCAATCACGGATAAGAAGCCAAAGGAAAGATAGGTATTCAAGTTTGTTTGCCCCAATGCCAGAGTTGAGAGAATCAGTCTTGACAACACCAATGTCAGTAAGGAGCAGCAGCAAGTTTATGATGAACAGTCCAACACAGGCAGATTCCAGGATGATGGGGCCCACTAGGAATCAGCCTGTTCTTGCTCTACAACGTAAACCTGTGGTCTGGAGTCCTCTTAAGCTAAGAACCATGAACAGAAAGTCATCACTCCTGCCGTATCGCTCAACCCAAATGCAGTAA 2352 0.4426 MSDQSIQIQMLAEKFNRFVLDYELKQPSITSEPDDVSKQVNENSDSVDENSMSQGIHEVSPDKGHTLPILKKILDLDTKIQDLKKHHISLSDEVKLTIESFPGTDVLKSVQLLGAEYELLKRKYLEESSERRRLYNEVIELKGNIRVFCRCRPLNASEIANGSASVVNFESSSDNELQVICAESSKKQFKFDHVFGPEDNQEAVFQQTKPIVTSVLDGYNVCIFAYGQTGTGKTFTMEGTPEHRGVNYRTLEELFRITDERNGTMKYKLSVSMLEVYNEKIRDLLVENSTQPTKKLEIKQAAEGTQDVPGLIEARVYGTEDVWEMLKTGNRVRSVGSTCANELSSRSHCLLRVTVMGENLINGQRTKSHLWLVDLAGSERVGKTEAEGERLKESQFINKSLSALGDVISALASKSAHIPYRNSKLTHMLQSSLGGDCKTLMFVQVSPSAADLGETLCSLNFATRVRGIEGGPARKQVDHTELFKYKQMVEKLKQDEKETNKLQDSLQIAQLRLATREQHCRTLQEKVRDLENQINEERKHRLKQESRALAAVSAQPSLSSQQTTAQNRKPPLNPSKLRQPLRKITNSMPPQSPRRSKNYTTFMNGKENSVRRASMATNSVRQAAPSTTGQFFQARRRVSIAVRPPPSTSTTQVIQPRRRVSIATLHPHTTSGMSTPLRTSAFRVTGGSNQQSRIRSQRKDRYSSLFAPMPELRESVLTTPMSVRSSSKFMMNSPTQADSRMMGPTRNQPVLALQRKPVVWSPLKLRTMNRKSSLLPYRSTQMQ 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium379g00009 783 MobiDBLite consensus disorder prediction 550 602 - -
Vium379g00009 783 FunFam Kinesin-like protein 139 508 - -
Vium379g00009 783 PRINTS Kinesin heavy chain signature 369 387 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium379g00009 783 PRINTS Kinesin heavy chain signature 418 439 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium379g00009 783 PRINTS Kinesin heavy chain signature 218 239 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium379g00009 783 PRINTS Kinesin heavy chain signature 338 355 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium379g00009 783 CDD KISc_C_terminal 142 469 - -
Vium379g00009 783 Pfam Kinesin motor domain 150 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium379g00009 783 SMART kinesin_4 142 476 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium379g00009 783 ProSitePatterns Kinesin motor domain signature. 368 379 IPR019821 GO:0003777|GO:0005524|GO:0007018
Vium379g00009 783 MobiDBLite consensus disorder prediction 539 602 - -
Vium379g00009 783 MobiDBLite consensus disorder prediction 723 742 - -
Vium379g00009 783 Coils Coil 485 547 - -
Vium379g00009 783 MobiDBLite consensus disorder prediction 43 57 - -
Vium379g00009 783 ProSiteProfiles Kinesin motor domain profile. 144 468 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium379g00009 783 PANTHER KINESIN-LIKE PROTEIN KLP-3 69 597 IPR027640 GO:0003777|GO:0007018
Vium379g00009 783 Gene3D Kinesin motor domain 139 511 IPR036961 -
Vium379g00009 783 MobiDBLite consensus disorder prediction 30 60 - -
Vium379g00009 783 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 504 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium379g00009 Vium-Chr379 67446 71524 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium379g00009 110 512 Calmodulin-binding Proteins AT5G65930 40.199 2.74e-80 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium379g00009 K10406 - gmx:100788477 1303.5