Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3792g00004 ATGGCAATTACTTCACTGACTCTTTTCAAAATGACCTTTGTTTTCTTCATTCTCTTCACTCTTCTCACACCTAAAGCCATGGCTGATTGTGAAGCTCAATCAGCAAACACATGCAACAACAAAGAGAAAGCGCTGTCACTAAAAGTTATAGCCATATTCACTATCTTAGTCTCTAGCATAATCGGTGTGACACTACCTTTAGTGACACGTTCAATTCCAGCTTTGAGTCCTGAAAACGATCTCTTCATAATCGTGAAGTGCTTCGCAGCTGGTATAATTCTTGGAACGGGCTTCATGCACGTGCTTCCCGATTCCTTTGACATGTTGTGGTCTGATTGCTTGAAGGAGAAACCGTGGCACGAGTTTCCATTTTCGGGGCTCGTGGCTATGTTTTCTGCCTTAATAACGATGATGGTGGATTCTTTGGCTACTAGTGTTTACACCAAGAGGAGTAAGACTGAGATTATTCCCGCTGAGAGCAGCCCTGCAGGTGGTGGAGACCAAGAGATGGGTGGTGTTGTTAACTTTGGCCACTTCCATGGCCACCACCACCACCACCATGAGAACAATACAGAAGGCCAAGAATCACAGCTTGTGCGTTATCGTGTTGTTGCCATGGTATTAGAACTTGGAATTGTGGTTCATTCAGTGGTTATAGGACTTGGCGTGGGAGCCTCAAACAACACATGCACCATAAAAGGTCTAATAGCTGCGCTTTGCTTCCATCAAATGTTTGAAGGCATGGGTCTTGGAGGGAGCATTCTGCAGGCCCAGTACAAGTTCTTAAAGAAGACCATCATGGTGTTTTTCTTCTCCGTGACAACCCCATTTGGAATTGCCCTTGGAATTGCATTGTCGACGACTTATAGAGAAAACAGTCCAAGTGCACTCATCACTGTGGGGTTGCTGAACGCTTCTTCTGCTGGTCTTTTGATCTACATGGCTTTGGTTGACCTTCTTTCTGCTGATTTCATGAGCCCTAGATTGCAGGGTAGTGTCAAACTTCAATTGAAATCTTACTTAGCAGTGTTTTTGGGTGCTGGTGGCATGTCTCTCATGGCAAAATGGGCTTAG 1074 0.4488 MAITSLTLFKMTFVFFILFTLLTPKAMADCEAQSANTCNNKEKALSLKVIAIFTILVSSIIGVTLPLVTRSIPALSPENDLFIIVKCFAAGIILGTGFMHVLPDSFDMLWSDCLKEKPWHEFPFSGLVAMFSALITMMVDSLATSVYTKRSKTEIIPAESSPAGGGDQEMGGVVNFGHFHGHHHHHHENNTEGQESQLVRYRVVAMVLELGIVVHSVVIGLGVGASNNTCTIKGLIAALCFHQMFEGMGLGGSILQAQYKFLKKTIMVFFFSVTTPFGIALGIALSTTYRENSPSALITVGLLNASSAGLLIYMALVDLLSADFMSPRLQGSVKLQLKSYLAVFLGAGGMSLMAKWA 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3792g00004 357 Pfam ZIP Zinc transporter 46 354 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Vium3792g00004 357 NCBIfam ZIP zinc/iron transport family 30 357 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vium3792g00004 357 PANTHER ZINC/IRON TRANSPORTER 44 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3792g00004 Vium-Chr3792 32416 35050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3792g00004 5 357 Inorganic Solute Cotransporters AT1G31260 61.326 5.60e-157 443
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3792g00004 K14709 - gmx:100801759 572.392