Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3788g00002 ATGGCTCATTTACTGGCGAGTAATCCCAGTCCTTCACATAAAATTGTGTGCTCAAACTTGGGGTACGGTGCTGGAAGAGGTTCCAAAAGTGATTCTTGCAGAGTGGGAAGGAAAAGGCGAGGAGATGGTTTGGTGTTGCAATGCAGCAGCAGCAGCAGCACAAGCACAAGCACAAGCACCAGCAGTTCGCAATTGCCTTGTGTTGATCAGGATGTGAGGTTGCAGATAGAGAATGGTAGCAGTGGAAAGCTGAAGCAGCAGTTTGAGTATTTGGCGTGTGAATATGGATGGAGAGTAAGGAGGCTATTTGAAAACGCAGATGAGATAAGGAAGGCATCTGAGGTTCAGGCCGAAGCATTTCATGTTCCTGTCTCTATTTTCAACGACGTGTTCCTTCAATTCTTTCAGGCGGAAGTGCTTTCGGGGCTCCTTTACAAGCTTAAAAACTCACCACCTAATAGGTATGCTTGTTTGGTAGCTGAGCCAGCAAAAGATGATCCAGATTCAGCAAAACAACTTGTGGGTGTCATAGACGTGACTGTCTTAAGAGACCGAAATGTGCTTCAACATCTTCCACCTGAAGCTGAAGAGTACCTCTACATATCAGGAATAGCCGTCTCCAAAATACTCAGGAGGAGGAAAATAGCGACTGCACTGTTGAAAGCCTGCGACATGCTTTCCATTTTGTGGGGTTTTGAGTTTCTTGCCCTTCGAGCCTATGAAGAAGATCTAGGTGCTCGCAAATTGTACACAAATGCCGGGTACCAAGTCGTGTCTCGAGATCCACCGTGGACAAGTAATTGGATTGGAAAGAAATGTCGTGTTCTTATGATCAAAAGAACTAGTTTGCCTAAGTAG 858 0.4557 MAHLLASNPSPSHKIVCSNLGYGAGRGSKSDSCRVGRKRRGDGLVLQCSSSSSTSTSTSTSSSQLPCVDQDVRLQIENGSSGKLKQQFEYLACEYGWRVRRLFENADEIRKASEVQAEAFHVPVSIFNDVFLQFFQAEVLSGLLYKLKNSPPNRYACLVAEPAKDDPDSAKQLVGVIDVTVLRDRNVLQHLPPEAEEYLYISGIAVSKILRRRKIATALLKACDMLSILWGFEFLALRAYEEDLGARKLYTNAGYQVVSRDPPWTSNWIGKKCRVLMIKRTSLPK 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3788g00002 285 PANTHER N-ALPHA-ACETYLTRANSFERASE 94 282 - -
Vium3788g00002 285 Gene3D - 105 261 - -
Vium3788g00002 285 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 107 282 IPR000182 GO:0016747
Vium3788g00002 285 FunFam Histone acetyltransferase HPA2 and related acetyltransferases 102 282 - -
Vium3788g00002 285 Pfam Acetyltransferase (GNAT) family 152 255 IPR000182 GO:0016747
Vium3788g00002 285 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 108 279 IPR016181 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Vium3788g00002 Acetyltransf_1 1.8e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3788g00002 - - gmx:100808330 451.44