Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3782g00004 ATGGTGCAAATGGATACTCTCCCTCTCCTCTTAACCCTAGCTGCTGCTCTTTTATCCACATATTTTCTTTGGTTTTATTTCTTGGCTCGAACCCTAAGGGGTCCAAAAGTGTGGCCAATGATTGGCAGCGTTCCAGAATTAGTGGTGAACCGGAATAGGGTTCATGACTGGATCGCTTCAAACCTACGCCAAACAGGAGGTTCCCCCACTTACCAAACATGCACTCTCAGTCTCCCTTTCTTTGCTCGCAAGCAGGGATTTTTTACCGTCACAAGCTGTCCTAGAAACATCGAACACATTCTCCGAACCCGGTTCGACAACTACCCTAAAGGGCCGCACTGGCAGGCGGCGTTCCACGACCTCCTAGGGCAGGGAATTTTCAATAGCGACGGTGAAACGTGGCTTATGCAGCGGAAAACCGCCGCGCTCGAGTTCACCACCCGAACCCTAAGGCAAGCCATGGCTCGGTGGGTGAACCGGACCATAAAAAACAGGCTATGGTGTATCCTGGACAAAGCTGCTAAGGAAAACGTATCAGTGGATTTGCAAGACCTTCTTCTACGTTTAACCTTTGATAACATTTGTGGACTCACCTTTGGAAAAGACCCTGAAACTCTCTCACCGGATCTCCGGGAAAACCCCTTCACTGTTGCCTTTGACACTGCCACAGAAATCACCTTGCAAAGGCTTTTATACCCGGGCATAATATGGAGATTCGAGAAGCTTCTTGGCATCGGTAAAGAGAAGAAACTGGAGCAGAGTTTGAAGATCGTCGAAACTTACATGAACGACGCCGTTTCAGCTCGCGAGAAATCGCCTTCCGACGACTTGCTATCAAGGTTCATGAAGAAGCGCGACGCCGCGGGAAAGCCGCTGAGCGCCGCAACGCTGCGTCAGATCGCGCTCAACTTCATCCTAGCTGGCAGGGACACGTCATCAGTGGCGCTAAGCTGGTTCTTCTGGCTCGTAATGAACCACCCCGCCGTGGAGGATAAGATCCTCGCGGAACTTACGGCGGTGCTCACTTCCACGCGAGGCGGAGACCGGCGGAGGTGGACGGAGGAGGCGGTGGACTTCGAGGAGGCGGAGAGGCTGGTTTACTTGAAAGCCTCGCTGGCCGAAACGCTGCGTTTGTATCCGTCGGTGCCGGAGGATTTCAAGCACGCTGTGGCGGACGACGTGTTGCCGGATGGCACGGCTGTTCCGGCTGGTTCGACTGTGACGTATTCGATTTACGCGATGGGGAGAATGAAGAGTGTGTGGGGAGAGGACTGCATGGAGTTTAAACCGGAGCGGTTTTTATCGGTTAAAGGAGACCGGTTCGAACCGCCAAAAGACGGTTACAAGTTCGTTGCGTTTAACGCTGGACCGAGAACCTGCTTGGGAAAGGACTTGGCTTACCTGCAGATGAAATCTGTGGCTTCAGCTGTGCTTCTGCGTTACCGCCTGTCGCCGGTTCCCGGTCATCGTGTGCAGCAGAAGATGTCACTGACTCTCTTCATGAAGAATGGGCTTCGTGTGTTCCTGCAGCCACGTCAGCTTCGTCCACATACTGCCATGTCAGCATAG 1569 0.5303 MVQMDTLPLLLTLAAALLSTYFLWFYFLARTLRGPKVWPMIGSVPELVVNRNRVHDWIASNLRQTGGSPTYQTCTLSLPFFARKQGFFTVTSCPRNIEHILRTRFDNYPKGPHWQAAFHDLLGQGIFNSDGETWLMQRKTAALEFTTRTLRQAMARWVNRTIKNRLWCILDKAAKENVSVDLQDLLLRLTFDNICGLTFGKDPETLSPDLRENPFTVAFDTATEITLQRLLYPGIIWRFEKLLGIGKEKKLEQSLKIVETYMNDAVSAREKSPSDDLLSRFMKKRDAAGKPLSAATLRQIALNFILAGRDTSSVALSWFFWLVMNHPAVEDKILAELTAVLTSTRGGDRRRWTEEAVDFEEAERLVYLKASLAETLRLYPSVPEDFKHAVADDVLPDGTAVPAGSTVTYSIYAMGRMKSVWGEDCMEFKPERFLSVKGDRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVASAVLLRYRLSPVPGHRVQQKMSLTLFMKNGLRVFLQPRQLRPHTAMSA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3782g00004 522 CDD CYP86A 74 505 - -
Vium3782g00004 522 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3782g00004 522 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3782g00004 522 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3782g00004 522 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3782g00004 522 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3782g00004 522 Gene3D Cytochrome P450 28 521 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3782g00004 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Vium3782g00004 522 PANTHER CYTOCHROME P450 24 506 - -
Vium3782g00004 522 SUPERFAMILY Cytochrome P450 23 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3782g00004 522 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3782g00004 522 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3782g00004 522 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3782g00004 522 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3782g00004 522 FunFam Cytochrome P450 27 515 - -
Vium3782g00004 522 Pfam Cytochrome P450 90 501 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3782g00004 Vium-Chr3782 32711 34747 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3782g00004 4 512 Cytochrome P450 AT5G58860 74.706 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3782g00004 K15401 - gmx:100787559 932.939