Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3780g00012 ATGTCAACCAACACCACCCATCTCCTCCGCCACAACCGGTGGCTCCCCTCCTCCATCAAACTGAAGACAACCCTTTTCTCGGAGCTCTCCGGCGCGGTGGGTGACCTAGGGACTTACATACCCATCGTGCTGGCTCTGTCTCTTGTCAACAACTTGAATCTCACTACCACACTGATCTTCACTTCGCTCTACAACATCGCCACCGGCTTGCTCTTCGGCCTCCCCATGCCGGTCCAGCCCATGAAGTCCATCGCCGCCGTTGCCATATCCGCCTCGCCGCCGCTCACCATCGCCCAGATCTCTGCCGCCGGTCTCTCCGTCGCCGCCGTCCTACTCGTCCTCGGAGCCACCGGTCTCATGTCTGTCATCTACCGCTACCTCCCCCTCCCCGTCGTCCGCGGAGTCCAACTCTCCCAGGGCCTCTCCTTCGCCTTCTCCGCCGTCAAATACATTCGCTACGACCAAGACCTCGCCAAATCAAAATCCGGCCCTCCACGCCCCTGGTTCGCCCTCGACGGCGTCGCCGTCGCCCTCGCAGCCGTACTCTTCCTCGTCCTCACAACCGGCGCCGGGGACGACCCACCTCCGCCACAACAACAACAAGAAGACGAAAATGAAAACAGAGTCAGGGTTCGCCGGAGGTTGCGGGTTTTGTCAACTATCCCTGCAGCGTTGATAGTGTTTCTGTTTGGTCTTGTGTTTTGTTTTGTTCGCGACCCTTCCATTTTCGGAGATCTTAAGTTTGGGCCTTCGAAGATTTCTTTGGTTAAGATTACCTGGGAAGATTTTAAGGTTGGATTCGTCAGCGCCGCAATTCCTCAGATTCCGTTATCCGTTCTGAATTCAGTTATTGCAGTTTGTAAGCTCTCCGGGGATTTGTTTCCCGAACGTGAAGCTTCGGCGATGCATGTTTCAGTGAGTGTGGGACTTATGAATTTCGTGGGGTGTTGGTTCGGAGCCATGCCCTGTTGCCACGGAGCTGGAGGTTTGGCGGGACAGTACAGGTTCGGAGGCAGGAGTGGTGCTTCGGTGGTTTTCCTTGGAATTGCAAAGCTCGTGCTTGCTCTGGTTTTCGGGAACTCCCGAAAGATCTTGGGCGAGTTTCCGATTGGGATTCTTGGAGTGCTTTGTTTGTTTGCAGTTGAATTAGCCATGGCTGCCAGAGACATGAACACTAAACCAGAATCGTTCGATGCTGTTTGTGCCGTGTTTCACTCACTGGTTCAAAGTGCTGCTTTGGGATTTTTTGGCATTGTCCTATACTTACTCCTCAAATTGAGGGAGCTTGAATGTGGAGCTTTTCCCTTTGGATTTTGCTCATCCAAAACCACCAAATCTTCTCTGCAGGAAGAAAACTGCAAGCTTAATTGCCTAGACAACATTTTTATTCTTATATATATATATACTGTATGTTCCAGAAAATGA 1425 0.5242 MSTNTTHLLRHNRWLPSSIKLKTTLFSELSGAVGDLGTYIPIVLALSLVNNLNLTTTLIFTSLYNIATGLLFGLPMPVQPMKSIAAVAISASPPLTIAQISAAGLSVAAVLLVLGATGLMSVIYRYLPLPVVRGVQLSQGLSFAFSAVKYIRYDQDLAKSKSGPPRPWFALDGVAVALAAVLFLVLTTGAGDDPPPPQQQQEDENENRVRVRRRLRVLSTIPAALIVFLFGLVFCFVRDPSIFGDLKFGPSKISLVKITWEDFKVGFVSAAIPQIPLSVLNSVIAVCKLSGDLFPEREASAMHVSVSVGLMNFVGCWFGAMPCCHGAGGLAGQYRFGGRSGASVVFLGIAKLVLALVFGNSLXKILGEFPIGILGVLCLFAGXELAMAARDMNTKPESFVXAVCAVFHSLVQSAALGFFGIVLYLLLKLRELECGAFPFGFCSSKTTKSSLQEENCKLNCLDNIFILIYIYTVCSRK 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3780g00012 477 PANTHER - 10 434 IPR031563 GO:0015098|GO:0015689
Vium3780g00012 477 Pfam Molybdate transporter of MFS superfamily 267 385 IPR031563 GO:0015098|GO:0015689
Vium3780g00012 477 Pfam Molybdate transporter of MFS superfamily 28 143 IPR031563 GO:0015098|GO:0015689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3780g00012 Vium-Chr3780 59139 60850 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3780g00012 1 418 Inorganic Solute Cotransporters AT1G80310 65.330 2.76e-174 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3780g00012 - - gmx:100776620 671.389