Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium376g00003 ATGGTAGGAGAACTCAGAGTGTTGACTGCACTTGATGTGGCGAAGACACAATGGTACCACTTCACAGCAATTGTGATAGCAGGAATGGGTTTCTTCACTGATGCCTATGACCTCTTCTGCATTTCCCTGGTTACTAAGCTGTTAGGGAGACTGTACTACACAGAACCAGGTGCACCAAAGCCAGGAACTCTTCCTCCAAGAGTTCAAGCTTCTGTCACTGGTGTTGCTCTCTGTGGCACCTTGGCTGGTCAACTATTCTTTGGTTGGCTCGGTGACAAATTGGGGAGAAAAAGGGTCTACGGTCTCACTCTTGTGCTCATGGTGGTGTGCTCCCTTGCCTCAGGACTCTCCTTTGGCTCCACTCCAAAGGGTGTCTTGGCCACACTTTGCTTCTTCAGGTTCTGGCTAGGGTTTGGGATTGGTGGTGACTACCCTCTTTCTGCCACAATCATGTCTGAATACGCCAACAAAAAGACTCGTGGGGCATTCATTGCAGCAGTGTTTGCCATGCAAGGATTTGGAATCTTGGCTGGTGGAGTAGTCGCCTTGATTGTTTCATATGCGTATGACCAAAAGTACAACCTTCCCACATACGAACAAAATCCAGAAGCCTCCATTGTGCCGTCATTTGACTATGTTTGGAGAATCATTTTGATGTTTGGTGCAATTCCGGCAGTACTCACCTACTACTGGCGCATGAAAATGCCTGAGACTGCACGTTACACAGCCCTCGTGGCCAAGAATGCAAAACAAGCTGCTTCAGACATGTCTAAGGTGTTGCAAGTGGAACTTGAAGCTGAAGAGGAGAAGGTGCAGAAACTGACACAGGAAAAGAGCCACAGGTATGGTTTGTTCAGCAAGGAATTTCTCAGACGCCATGGCTTGCATTTGGTTGGAACCACCACCACTTGGTTCTTGTTGGACATAGCATTCTACAGCCAGAACCTTTTCCAAAAAGACATCTTCAGTGCAATTGGGTGGATCCCTCCAGCACAGACAATGAATGCAATTCATGAGGTATACAAGATTTCAAGAGCACAAACACTGATAGCATTGTGCAGCACTGTGCCAGGTTACTGGTTCACAGTGTTTCTGATTGATTACATGGGCCGTTTTGCCATCCAATTGATGGGGTTCTTCTTCATGACAGTATTCATGTTTGCTTTGGCTATACCATATGATCATTGGACTAAGAAAGCAAACAGAATAGGGTTTGTGGTGATATACTCCCTCACCTTTTTCTTTGCCAACTTTGGTCCAAATGCCACCACATTTGTTGTGCCAGCAGAGATCTTCCCAGCAAGGCTTAGGTCAACCTGTCATGGAATCTCTGCTGCTGCAGGAAAGGCTGGTGCAATTGTGGGAGCATTTGGGTTCCTATATGCTGCACAAAGCAAGGACCCTAAAAAGACTGATGCAGGCTACCCTACAGGAATTGGGATTAAGAACTCCCTCATTGTGCTTGGGGTTATCAACTTCTTTGGAATGTTGTTCACCTTGCTGGTTCCTGAATCAAAGGGTAAGTCACTGGAGGAGTTGAGTGGGGAGAATGATCGAAGTGCTGATGCTGAGCCTGAAGTTTCTGCTGCGACAAGTCGTGTTTGA 1605 0.4679 MVGELRVLTALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRLYYTEPGAPKPGTLPPRVQASVTGVALCGTLAGQLFFGWLGDKLGRKRVYGLTLVLMVVCSLASGLSFGSTPKGVLATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGVVALIVSYAYDQKYNLPTYEQNPEASIVPSFDYVWRIILMFGAIPAVLTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVELEAEEEKVQKLTQEKSHRYGLFSKEFLRRHGLHLVGTTTTWFLLDIAFYSQNLFQKDIFSAIGWIPPAQTMNAIHEVYKISRAQTLIALCSTVPGYWFTVFLIDYMGRFAIQLMGFFFMTVFMFALAIPYDHWTKKANRIGFVVIYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPKKTDAGYPTGIGIKNSLIVLGVINFFGMLFTLLVPESKGKSLEELSGENDRSADAEPEVSAATSRV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium376g00003 534 ProSiteProfiles Major facilitator superfamily (MFS) profile. 23 507 IPR020846 GO:0022857
Vium376g00003 534 Pfam Sugar (and other) transporter 24 513 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vium376g00003 534 CDD MFS_PhT 24 506 - -
Vium376g00003 534 MobiDBLite consensus disorder prediction 511 534 - -
Vium376g00003 534 Gene3D MFS general substrate transporter like domains 19 530 IPR036259 -
Vium376g00003 534 FunFam Inorganic phosphate transporter 1-6 19 528 - -
Vium376g00003 534 Coils Coil 250 277 - -
Vium376g00003 534 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 20 510 - -
Vium376g00003 534 NCBIfam phosphate:H+ symporter 10 516 IPR004738 GO:0005315|GO:0006817|GO:0016020
Vium376g00003 534 SUPERFAMILY MFS general substrate transporter 11 514 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium376g00003 Vium-Chr376 46584 49130 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium376g00003 4 522 Inorganic Solute Cotransporters AT3G54700 80.154 0.0 870
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium376g00003 K08176 - gmx:100780201 979.163