Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3747g00004 ATGGACATTGATGATGATTTCACGTTTTGTCAGGTCAGTGCACCTGTTGATCTTGAAACAAACAAGCTTGCTTCAGATGTTGCTGATATTTCTATTAAAGAAGAATCTTCAAATGCAACTAGTACCATTCAGGATGGTGGTTTTTTGTGGAAGGATGGTTTATCCAAGGATTCCAACTCTAAGGAGGCCAATGTTGGTTCTTTGTCTTTCACTGTTACTAACACAAGTTCAAGTCAGCCAAATGAATCCAGTCAATCTACCCCAAAATCTGCACCAGGTAAGGCTAACAATTTGTCGTCGAAGTTGCCAGAAGAGAAGAATTCTGCTAAGAAGCCAGTGGTTCGGGCCAAAGTTCCCTTTGAAAAAGGCTATAGCCAAATGGACTGGCTCAAGCTCACCCGAACTCATCCAGACCTTGCAGGTTTGAAAGGGCAATCAAACAAGAGACTTATTTCTATGGATGAAGTTAGAAAACACAAAACAGAAGGTGACATGTGGACTGTATTAAAAGGTCGTGTTTACAATATATCTCCATATATGAAGTTTCACCCTGGAGGTGTTGATATGTTGATGAAGGCAGTAGGAAAAGATTGCACATCTTTATTCAATAAATACCATGCTTGGGTTAATGCTGAATTCTTATTGGAGAAATGTGTTGTGGGTACCTTAGATGAGAGTCACTGA 684 0.3991 MDIDDDFTFCQVSAPVDLETNKLASDVADISIKEESSNATSTIQDGGFLWKDGLSKDSNSKEANVGSLSFTVTNTSSSQPNESSQSTPKSAPGKANNLSSKLPEEKNSAKKPVVRAKVPFEKGYSQMDWLKLTRTHPDLAGLKGQSNKRLISMDEVRKHKTEGDMWTVLKGRVYNISPYMKFHPGGVDMLMKAVGKDCTSLFNKYHAWVNAEFLLEKCVVGTLDESH 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3747g00004 227 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 179 186 IPR018506 GO:0020037
Vium3747g00004 227 PRINTS Cytochrome B5 signature 183 197 IPR001199 -
Vium3747g00004 227 PRINTS Cytochrome B5 signature 173 183 IPR001199 -
Vium3747g00004 227 PRINTS Cytochrome B5 signature 211 223 IPR001199 -
Vium3747g00004 227 FunFam Cytochrome b5 reductase 4 146 227 - -
Vium3747g00004 227 Gene3D - 145 227 IPR036400 -
Vium3747g00004 227 SMART Cyt_b5_2 151 224 IPR001199 -
Vium3747g00004 227 PANTHER CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER 1 226 - -
Vium3747g00004 227 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 148 224 IPR001199 -
Vium3747g00004 227 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 148 226 IPR036400 -
Vium3747g00004 227 MobiDBLite consensus disorder prediction 34 114 - -
Vium3747g00004 227 Pfam Cytochrome b5-like Heme/Steroid binding domain 153 223 IPR001199 -
Vium3747g00004 227 MobiDBLite consensus disorder prediction 59 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3747g00004 Vium-Chr3747 21241 24367 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3747g00004 149 226 NADPH P450 reductases AT1G26340 43.590 3.75e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3747g00004 - - ccaj:109814642 354.369