Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3725g00021 ATGGCTGTTTTTTCTTCAGTTTCTTCTCCTCTTTTGCTCACCTTCTTCCTCCTCTTCGGCCTCTCTGTAGCTAGGGAAATACTGGTTGGAGGTAAGACTGATGCTTGGAGAGTTCCAGCCTCTGAATCAGACGCACTTAACCAATGGGCCGAAAGGTCTCGTTTCCAAGTTGGCGACTTTCTTGTTTGGAAATATGATGGTGGGAAAGACTCAGTTTTGCAAGTGAGCAAAGAGGAGTATGTAAACTGCAGCATCTCAAACCCTATAAAGGTGTACAGTGATGGAACGACGAAGGTGAAGCTTGACCGTCCTGGGCCGTTCTACTTCATCAGTGGGGCAAAGGGTCACTGTGAGAAGGGTCAGAAGCTTGTGGTGGTGGTTTTGACTCCGAGGGGAAGGTCCAGTGGCATTGTTTCTTCACCAGCACCTGCTCCTGCACCTTCTCTTGCTGAGTTTGATGGTCCTGCTGTTGCGCCTACTAGCAGTGCCAATGCTTTGCATGGGGGCATTGTCATGGTGGCTCTGGTTGCTATGTGGGGAATTTTTATGTAA 552 0.4891 MAVFSSVSSPLLLTFFLLFGLSVAREILVGGKTDAWRVPASESDALNQWAERSRFQVGDFLVWKYDGGKDSVLQVSKEEYVNCSISNPIKVYSDGTTKVKLDRPGPFYFISGAKGHCEKGQKLVVVVLTPRGRSSGIVSSPAPAPAPSLAEFDGPAVAPTSSANALHGGIVMVALVAMWGIFM 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3725g00021 183 Gene3D - 23 131 IPR008972 -
Vium3725g00021 183 PANTHER BLUE COPPER PROTEIN 26 146 IPR039391 GO:0009055
Vium3725g00021 183 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Vium3725g00021 183 FunFam Early nodulin-like protein 1 24 132 - -
Vium3725g00021 183 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Vium3725g00021 183 CDD OsENODL1_like 25 128 IPR041846 -
Vium3725g00021 183 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3725g00021 Vium-Chr3725 253646 254844 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3725g00021 8 183 Phytocyanin Superfamily AT4G31840 50.273 1.84e-60 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3725g00021 - - gmx:100305787 268.47