Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium371g00003 ATGGAGTTTTGGGGTGTTGAGGTGAAAAGTGGAGAATCTCTCAAGGTTGATCCAGGAGACGACAAGATTATCCACCTTTCAAATGCATGCCTGGGGGATGTGACTAAGGCTAAAGGAGAATCGGTGGCCCTGTATGTGAAGTTTGGTAACCAGAAGCTTGTGCTTGGAACGCTTTCTTCTGATAAATTTCCTCAAATATCTTATGATTTGATATTTGAGAAGGAATTTGAGCTATCCCATAGCTGGAAAAATGGGAGTATCTTCTTTACCGGATTTAAAGCTCAATCTCAGTCGGAGTCGGATAATGATGAAGATTCTGAAGATTTTGATGAAGATATTCCAGTTAGTGCTGCCAATGGGAAACCTGACTTTGAGATTAAGCATGGTGTCAAACCTGATGAAGCTAAACAGAAAAAGACAGCAGATCCAAAGAAAAATGAGAAGGCTAAGGAAAAGGATGCAGATGGTGAAGATGAAGATTCATCCGAATCTGATTCTGACGATGATTCAAGTGAAGATAAGCCCACAACAAATGGTGACAGAGAAAGTAGTGAAGGTGATGAGGATAGCGATGAAGAGGATGAGGATGATGACGAGGATGAGGATGATGATGATGATGAATCGGATGAGGAGACACCCAAGAAGATTGAAGCAGGCAAGAAGCGGAATATTGACTCTGCCAAGAAAACAACTATCCCTGTGAAGAAGGCAAAATTTGTTACTCCTCAGAAGACTGATAGCAAGAATGTTGTCCATGTCGCAACGCCTCACCCTTCTAAGCAGGCTGGAAAAGCAATTGCAGATAACAAGCGGCAGACTCCGAAGTCAGGGGGAGATTACAGCTGCAAGCCTTGCAGCAGTTGGTTTGCAGGTCATTTAAGACAGAAGATGCCTTAA 897 0.4281 MEFWGVEVKSGESLKVDPGDDKIIHLSNACLGDVTKAKGESVALYVKFGNQKLVLGTLSSDKFPQISYDLIFEKEFELSHSWKNGSIFFTGFKAQSQSESDNDEDSEDFDEDIPVSAANGKPDFEIKHGVKPDEAKQKKTADPKKNEKAKEKDADGEDEDSSESDSDDDSSEDKPTTNGDRESSEGDEDSDEEDEDDDEDEDDDDDESDEETPKKIEAGKKRNIDSAKKTTIPVKKAKFVTPQKTDSKNVVHVATPHPSKQAGKAIADNKRQTPKSGGDYSCKPCSSWFAGHLRQKMP 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium371g00003 298 MobiDBLite consensus disorder prediction 156 170 - -
Vium371g00003 298 FunFam Histone deacetylase HDT1 1 98 - -
Vium371g00003 298 MobiDBLite consensus disorder prediction 124 155 - -
Vium371g00003 298 MobiDBLite consensus disorder prediction 95 280 - -
Vium371g00003 298 MobiDBLite consensus disorder prediction 212 232 - -
Vium371g00003 298 Gene3D Nucleoplasmin core domain 1 99 - -
Vium371g00003 298 MobiDBLite consensus disorder prediction 184 211 - -
Vium371g00003 298 Pfam Nucleoplasmin-like domain 3 92 IPR041232 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium371g00003 Vium-Chr371 5233 16350 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium371g00003 1 94 C2H2 Transcription Factor Family AT5G03740 52.128 2.00e-34 125