Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3678g00005 ATGGCTTCCAATTCTACATCTGGAAATGCTTGCCCGGCGCCTATGAAAGCCACATCAAATGGCGTGTTTCAGGGAGACGACCCTCTTGATTTTGCGCTTCCCCTAGCTATTTTGCAGATATGCCTTGTTCTTGTGGTCTCAAGGGGACTGGCATATCTTCTAAAACCCTTAAGGCAACCCAGAGTNATAGGTTATGAGGCAATTGGAGGGATACTTCTTGGTCCATCAGCTCTTGGACGGAATAAAAGCTATATGCAGGCAGTTTTCCCACCCAGGAGTATTACAGTATTAGACACTCTAGCAAACATTGGCCTTATATTCTTTCTATTCTTAGCAGGCCTGGAGTTAGATCTTAAATCTCTTCGTCAATCTGGAAACCGAGTCCTTGCTATTGCTATGGCTGGAATAAGCCTACCCTTTGTAATAGGAATTGGTTCATCATTTGTTCTAAAACAATCAATTGCCAAAGGTTCAGATAGTGCCGCATTTCTTGTATTCATGGGTGTTGCTCTGTCCATTACTGCATTTCCTGTATTGGCCCGTATTTTGGCTGAGTTAAAACTTCTAACCACAAACGTTGGCAGAACAGCTATGTCAGCCGCAGCAATTAATGATATAGCTGCCTGGATTCTGCTTGCTCTGGCTGTTGCATTGTCAGGCCATGAGCGATCTCCACTTGTGTCATTGTGGGTCTTCTTAGCGGGGTGTGGTTTTGTCATTTGTGCAATAATCATTGTCCCTCCAATTTTCAAATGGGTGAGCCAACGATGCCATGAAGGTGAACCAGTTGAAGAGGTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGGCTTGTCACAGATGCTATTGGAATCCATGCCATGTTTGGTGCCTTTGTTGTTGGAGTTTTGCTCCCAAATGATGGACCGTTTGCCAGTGCTCTTGTGGAGAAAGTAGAGGATCTTGTGTCTGGTCTATTTCTCCCTCTCTATTTTGTGTCAAGTGGATTGAAGACTAATGTAGCCACCATAAAGGGGCTGCAATCATGGGGTCTTCTGGCTTTTGTTATATTTACAGCTTCTTTTGGAAAGATTCTTGGGACTTTTGTTGTTTCCCTTCTCTGTAAACTACCTTTTAACGAGGCTCTGGTGCTGGGGTTCTTAATGAATTGCAAAGGCCTAGTTGAATTAATAGTCCTGAACATTGGCAAAGATAGAAAGGTTTTGAATGATCAGACCTTCGCCATCATGGTTCTTATGGCTGTTTTCACTACCTTCATCACCACTCCTCTTGTGATGGCCGTGTATAAGCCTGCAAGGAAGGGAGGAATAGCTGACTACAAATATAGAACAATTGGGAGGAAAAATGCAAATAGACAACTGAGGATTCTCGCCTGCTTCCATGGTGCAAGAAATATTCCATCAATGATAAATTTGATTGAGGCTTCAAGAGGAATCCAGAAGCGTGATGATCTTTGTGTGTATGCAATGCACCTTAAAGAATTCTCTGAGAGGTCCTCATCTATATTAATGGTACATAAGGCAAGAAGAAATGGGTTGCCATTCTGGAACAAAGGTTCTCATTCACCTTCTAACCATGTTATTGTAGCGTTTGAGGCTTACAGGCAACTAAGTCAAGTGTCCATCCGGCCAATGACAGCCATCTCATCTATGGCTAACATACATGAAGACATTTGTGCAACTGCTGAGAGGAAGGAAGCCGCAGTCATCATTCTTCCATTTCATAAGCATCAAAGTTTGGATGGTTCACTACATAACACTAGAAATGATTTTCGATGGGTTAACAAAAGAGTACTTGAGCATGCACCATGCTCAGTTGGAATTTTTGTTGATCGGGGGCTCGGTGGTACCTCCCATGTCTCTGCAAGTAATGTTTCTTACCGTGTTACAGTGCTTTTCTTTGGTGGTGGTGATGATCGTGAAGCCCTTGCTTACGGAGGTCGTATGGCTGAGCATCCTGGCATCAGATTGTTGGTTATTCGCTTTGTAGTTGAACCACCTAATGAAGCAGAGATTTTAAGAGTTGATGTGGGTGACTCCTCCTCCAGCACCAAATTAGTCTCACAGGATGAGCAATTCCTCGATGAATTTAAAGTGAAAACAGCCAATGATGACTCCATCAACTATGAAGAGAGAATAGTTAAAAATGCAGCAGAAACAGTTGCTATTATCCGTGAGGTTAATAGCTCGAGTCTGTTTCTTGTGGGTTCAAGGCCAGTCAGTGAAGTTGCCTGTGCTCTGAAAAGCAGTGAATGCCCTGAACTAGGACCTGTGGGTGGTTTGTTGGTATCACAAGATTACCCCACAACAGCATCCGTTTTGGTAATACAACAGTATAACAACGATGGGGCGCCAATAAATTTGACGCCGGAAATGGAGGAACAATTACCCTATCAGGATTCAGGTTCTGCTGCATAA 2424 0.4336 MASNSTSGNACPAPMKATSNGVFQGDDPLDFALPLAILQICLVLVVSRGLAYLLKPLRQPRVIGYEAIGGILLGPSALGRNKSYMQAVFPPRSITVLDTLANIGLIFFLFLAGLELDLKSLRQSGNRVLAIAMAGISLPFVIGIGSSFVLKQSIAKGSDSAAFLVFMGVALSITAFPVLARILAELKLLTTNVGRTAMSAAAINDIAAWILLALAVALSGHERSPLVSLWVFLAGCGFVICAIIIVPPIFKWVSQRCHEGEPVEEVYICATLAAVLAAGLVTDAIGIHAMFGAFVVGVLLPNDGPFASALVEKVEDLVSGLFLPLYFVSSGLKTNVATIKGLQSWGLLAFVIFTASFGKILGTFVVSLLCKLPFNEALVLGFLMNCKGLVELIVLNIGKDRKVLNDQTFAIMVLMAVFTTFITTPLVMAVYKPARKGGIADYKYRTIGRKNANRQLRILACFHGARNIPSMINLIEASRGIQKRDDLCVYAMHLKEFSERSSSILMVHKARRNGLPFWNKGSHSPSNHVIVAFEAYRQLSQVSIRPMTAISSMANIHEDICATAERKEAAVIILPFHKHQSLDGSLHNTRNDFRWVNKRVLEHAPCSVGIFVDRGLGGTSHVSASNVSYRVTVLFFGGGDDREALAYGGRMAEHPGIRLLVIRFVVEPPNEAEILRVDVGDSSSSTKLVSQDEQFLDEFKVKTANDDSINYEERIVKNAAETVAIIREVNSSSLFLVGSRPVSEVACALKSSECPELGPVGGLLVSQDYPTTASVLVIQQYNNDGAPINLTPEMEEQLPYQDSGSAA 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3678g00005 807 Pfam Sodium/hydrogen exchanger family 42 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vium3678g00005 807 Gene3D - 522 755 - -
Vium3678g00005 807 PANTHER CATION/H + ANTIPORTER 10 782 - -
Vium3678g00005 807 Gene3D - 35 437 IPR038770 -
Vium3678g00005 807 FunFam Cation/H(+) antiporter 15 35 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3678g00005 Vium-Chr3678 34502 40635 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3678g00005 1 805 Antiporter Super Family AT5G41610 68.596 0.0 1090
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3678g00005 K26731 - gmx:100810155 1362.82