LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vium3676g00011	ATGCACGGAAGGTATGGGGAGAGATCGAGCGACGCGGCGCGAGAGAAGCGAGGTTTGGATTCGGCTTCGGCCGAAGAAGGCCAACCTGATCGGAAACGACCTGCTTTGGCTAGTGTAATTGTTGAAGCCCTGAAGGTTGACAGTCTGCAGAAACTTTGCTCATCACTGGAGCCTATTCTACGCAGAGTTGTTAGTGAAGAAGTCGAGCGTGCTTTGGCAAAACTATGCCCCTCCAAGCTTGCTGGCAGGTCTTCCCCAAAGCGAATAGAAGGTCCTGATGGCACAAATTTACAATTGCAGTTCAAGACCAGGCTGTCCCTTCCCCTCTTCACAGGTGGAAAGGTGGAGGGAGAGCAAGGTTCAGCTGTTCATATTGTTTTGATTGATGCAAACACTGGCAATATTGTCACATCAGGGCCAGAGTCATGTGTCAGGCTAGATGTTATTGTACTGGAGGGAGATTTCAATAACGAGGATGATGATAATTGGACTGAAGAAGAATTTGATAGTCATATTGTGAAAGAGCGGGAAGGAAAAAGGCCTCTTCTAACAGGTGATTTGCAAATCACACTGAAGGAAGGTGTAGGAACACTGGGTGAGCTTACATTTACGGACAACTCTAGCTGGATAAGGAGTAGGAAGTTCAGGTTGGGCCTGAAAGTTGCCTTGGGTTGCTGTGAGGGAATGCGTATCCGTGAAGCCAAATCAGAACCTTTCACCGTTAAGGATCATCGCGGAGAATTATACAAGAAGCACTACCCTCCTGCCTTGAATGACGAGGTCTGGAGACTGGAGAAAATTGGCAAGGATGGGTCATTTCACAAAAGGCTAAATAAAGCTGGAGTATATACTGTTGAAGACTTCTTAAGACTTGTGGTCAGAGACCCTCAGAGATTGCGGAATATCCTTGGAAGCGGCATGTCAAATAAGATGTGGGATATTCTTGTTGAACATGCCAAGACTTGCGTTCTCAGTGGAAAACATTATGTGTACTATCCTGAAGATGCAAGAAATGTGGGTGTTGTTTTCAACAATATTTATGAATTAAGTGGCTTAATTGCCAACGATCAATTTTACTCAGCTGATTCTCTCTCTGAGAATCAAAAGGTTTATGTAGACACGTTGGTGAAGAAAGCATATGATAATTGGATGCACGTTATCGAGTATGATGGGAAGTCTCTGGTAAATGACATTGAGGATAAGACTTTGGACACCGCTCATCCTCAGGCACCAATGACTTCCCATGAATATTCAAACTCCCTTCAACAGATGTCCATCCCAGCTTTGCCACTTCCAGGACATGCTGGCCAGCCTTCAATGGATTCAGGAGTAACAGTTGGAGGTTATCATGATGTTACAACTTCTAGATTCTCCTTGCAACCACAGAATCCTAGTCTTAACTCTTCCATTCAGTTTGATGATAACGCATTTTCTCTACAAAACCAGTTGATGAGTGTTCCACACCATGCCCAACTTCCAAGAAATGAGAATGGACTAACTGTTGGTCCTGAACAATCATCTACACATGGCTTTGAGCCTGTCAGCATTTCAAATCCTACTTATAGAGGAGTTGAAGAATACTTCCCTGAGGAAGAAATTCGTATTAGAAGTCACGAGATGCTAGAAAATGAAGATATGCAGCAACTACTCCGTATGTTTAACATGGGGGGCCAACCAAATCCTACCTTTAATGGCCATAATGATGGGTACCCTAGCTCATCTACATACATTTCTGCAAACCCCATGGGCTACAATTTTGATGATGAACCAAATCGTTCCTCAGGCAAAGCTGTTGTAGGCTGGCTCAAGCTGAAGGCAGCATTAAGATGGGGGATTTTTATTCGGAAACAAGCTGCTGAGAGACGGGCACAACTTGTTGAATTGGACGACCCATAG	1896	0.4441	MHGRYGERSSDAAREKRGLDSASAEEGQPDRKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLCPSKLAGRSSPKRIEGPDGTNLQLQFKTRLSLPLFTGGKVEGEQGSAVHIVLIDANTGNIVTSGPESCVRLDVIVLEGDFNNEDDDNWTEEEFDSHIVKEREGKRPLLTGDLQITLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVALGCCEGMRIREAKSEPFTVKDHRGELYKKHYPPALNDEVWRLEKIGKDGSFHKRLNKAGVYTVEDFLRLVVRDPQRLRNILGSGMSNKMWDILVEHAKTCVLSGKHYVYYPEDARNVGVVFNNIYELSGLIANDQFYSADSLSENQKVYVDTLVKKAYDNWMHVIEYDGKSLVNDIEDKTLDTAHPQAPMTSHEYSNSLQQMSIPALPLPGHAGQPSMDSGVTVGGYHDVTTSRFSLQPQNPSLNSSIQFDDNAFSLQNQLMSVPHHAQLPRNENGLTVGPEQSSTHGFEPVSISNPTYRGVEEYFPEEEIRIRSHEMLENEDMQQLLRMFNMGGQPNPTFNGHNDGYPSSSTYISANPMGYNFDDEPNRSSGKAVVGWLKLKAALRWGIFIRKQAAERRAQLVELDDP	631

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vium3676g00011	631	Pfam	Calmodulin binding protein central domain	256	322	IPR046830	-
	Vium3676g00011	631	Pfam	Calmodulin binding protein C-terminal domain	327	389	IPR046829	-
	Vium3676g00011	631	MobiDBLite	consensus disorder prediction	1	33	-	-
	Vium3676g00011	631	Pfam	Calmodulin binding protein-like N-terminal domain	97	244	IPR046831	-
	Vium3676g00011	631	PANTHER	OS02G0177800 PROTEIN	14	546	IPR012416	GO:0005516
	Vium3676g00011	631	MobiDBLite	consensus disorder prediction	1	32	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vium3676g00011	Vium-Chr3676	72528	77976	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vium3676g00011	14	626	Calmodulin-binding Proteins	AT5G57580	61.550	0.0	758

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vium3676g00011	-		-	gmx:100812605	1157.51