Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3674g00001 ATGGAGTCTGTGTGGTTCTCCACCACTGGATCTGCTGACCCCCGTTGTGGCTTCTTGGCCGTCTTACTGCTGTCACTGCTCTTGTGCTCAACATTCTCTTCCACGGAAGCCTATGATGCACTTGATCCAACTGGCAACATTACAATCAAATGGGATGTTATAAGCTGGACACCAGACGGTTATATTGCTGTTGTTACAATGTACAACTTTCAACAGTATCGGCATATTCAGGCTCCTGGATGGATACTAGGGTGGACATGGGCAAAGAAGGAAGTAATTTGGAATGTAGTGGGAGGCCAAACCACAGAGCAAGGGGACTGTTCAAGGTTCAAAGGGAACATTCCTCATTGTTGTAAGAAGGATCCAACCGTCGTGGATTTACTGCCTGGAACTCCTTACAACCAGCAGATTGCCAATTGTTGCACTGGAGGAGTCCTAACTTCATGGGCCCAGGACCCTGAACATGCAATAACCTCATTTCAACTTAGTGTTGGTTCTGCAGGAACAACTAACAAAACGGTCAAACTGCCAAGAAATTTTACCCTTAAAGCACCAGGGCCTGGTTATACTTGTGGACCTGCAAAGATTGTGAAACCAACTAAGTTTATTACCAAAGACAAGAGGAGAACCACTCAAGCATTGATGACCTGGAATGTTACGTGCACGTATTCTCAATTCCTAGCTCAGAAGACTCCAACGTGCTGTGTTTCTCTTTCATCCTTCTACAACAGTACAATAGTAAACTGCCCTACCTGCACCTGTGGTTGCCAAAACAAAACAGAACCTGGAAGCTGTGTAGATCCTAATTCCCCACATTTAGCTTCAGTTGTATCACCCCCAGGCAAAGCTATAAATACACCTCTGGTCCGATGCACCAATCACATGTGTCCTATTCGAGTGCATTGGCACGTGAAACTTCAATATAAAGAGTACTGGAGGATCAAGATCACAATCACAAATTTCAATTACATGGTGAATTATTCACAATGGAACCTTGTTGTCCAGCACCCAAACTTTGACAATGTAACTCAGGTTTTCAGCTTTAACTACAAGCCGATAACACCTTATGTGGGCTTAAATGATACTGGTATGTTGTGGGGAGTGAAGTTCTACAATGATTTACTTACTTCAGCAGGACCCCTTGGGAATGTGCAGTCTGAGCTCTTATTCCGAAAGGACAAATCAACCTTCACATTTGATAAGGGATGGGCTTTCCCTCGAAGAATATATTTCAACGGAGATAACTGTGTAATGCCACCTCCTGATGCCTATCCATGGTTGCCAAATGCAAGTTCAAGACTACTTTTCTCTTTACTAAGCACATTTTTTGGCACTTTATACTGTGTGGTAATGTTATTGACTTAA 1365 0.4337 MESVWFSTTGSADPRCGFLAVLLLSLLLCSTFSSTEAYDALDPTGNITIKWDVISWTPDGYIAVVTMYNFQQYRHIQAPGWILGWTWAKKEVIWNVVGGQTTEQGDCSRFKGNIPHCCKKDPTVVDLLPGTPYNQQIANCCTGGVLTSWAQDPEHAITSFQLSVGSAGTTNKTVKLPRNFTLKAPGPGYTCGPAKIVKPTKFITKDKRRTTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNSTIVNCPTCTCGCQNKTEPGSCVDPNSPHLASVVSPPGKAINTPLVRCTNHMCPIRVHWHVKLQYKEYWRIKITITNFNYMVNYSQWNLVVQHPNFDNVTQVFSFNYKPITPYVGLNDTGMLWGVKFYNDLLTSAGPLGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDAYPWLPNASSRLLFSLLSTFFGTLYCVVMLLT 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3674g00001 454 PANTHER PROTEIN COBRA 26 441 IPR006918 GO:0010215|GO:0016020
Vium3674g00001 454 PIRSF COBRA 13 454 IPR006918 GO:0010215|GO:0016020
Vium3674g00001 454 Pfam COBRA-like protein 61 224 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3674g00001 Vium-Chr3674 26531 30926 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3674g00001 19 453 COBRA Gene Family AT3G02210 72.936 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3674g00001 - - vun:114177145 929.858