Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3649g00007 ATGGATCTTCAAACCTTCTACTTCATATCCATTCTCATTTTTATGTTTATTGCACACAAAATAATAACAAAGAAATCTGCCTCAACTCCAAATTTGCCACCAGGGCCGTGGAAGCTACCAATCATAGGGAACATACACAACCTCGTTGGCTCACTTCCCCATCGTAGACTGAGAGATTTATCAGCAAAATATGGACCCTTGATGCATCTGAAGCTTGGAGAGGTTTGTACCATTGTGGTTTCATCTGCAGAGTGTGCTAAAGAAGTGTTAAAAACCCATGATCTTATCTTTGCATCAAGGCCTCCAATACTAGCTTCAAAGATAATGTCTTATGATTCTATGGGCATTGCTTTTTCTCCTTATGGTGATTATTGGAGACAGCTAAGGAAGATTTGTGCGTTGGAGTTATTAAGCTCGAAACGTGTCCAATCTTTCCAGCCAATCAGAGAGGAAGAGCTCACTAAATTCATCAAAAGAATTGCTTCAAGAGAAGGGTCACCCATCAATCTCACCAAAGAAATCCTTAAAACAATATCTACAATTGTTGCAAGGACAGCCCTTGGAAGCAAGTATAGGGACCATCAAAAGTTCATATCAGCTGTAAGGAAAGCCACAGAGGTTGCTGGAGGTTTTGACTTGGGAGATTTGTACCCTTCTGCCGGATGGCTTCAGAACATCTCAGGGTTGAAGTCTAAGATTGAACAGTGTCATCAACAAACTGATCAGATAATGCAGAGGATCGTGGATGATCACAGAGAGGCTAAGTTAAGTGTTGCACAAGGCCAGGGTGAACAAGTGGAGGATGATCTTGTAGATGTGCTCATGAAGGATGAGTTTGGCTTAAGTGACAATGGTATCAAGGCGGTGATTTTGGATATCTATGGAGGGGGGAGTGAGACATCATCTACTACCATAACATGGGCAATGGCAGAGATAATAAAAGATGCAAGAGTAATGAAGAAGGTACAAGCTGAGGTAAGAGAGGTATTTGGTAAAGAAGGACAGCCTAATGAAAGTGACATGGAGAATCTAAAATATTTGAAATGTGTTGTGAAAGAGACATTGAGACTGCACCCTCCTGGTCCCCTTCTACTTCCAAGAGAGTGTGGAGAAGCTTGTGAGATAAAAGGGTATGAGATACCAACGAAAAGCAAGATCATTATCAATGCTTGGGCCATTGGAAGAGACCCAAATCATTGGACTGAGGCAGAGAGGTTTTATCCAGACAGGTTCATTGAAAGTGGTGTTGACTACAAAGGCAATAATTTTGAGTATATTCCATTTGGAGCTGGAAGAAGAATGTGCCCAGGCCTTACATTTGGCTTGACCACTGTTGAGTTTCCTCTTGCATTGTTAATGTACCATTTTGATTGGAAAGCTCCCAATGGAATTAAGAATGAAGATTTGGATATGACTGAGGCTTTTGGAATATCCGTTGGTAGAAAACATGATTTGCAACTAATTCCTGTCACTTTCCGTCCTTGA 1485 0.4121 MDLQTFYFISILIFMFIAHKIITKKSASTPNLPPGPWKLPIIGNIHNLVGSLPHRRLRDLSAKYGPLMHLKLGEVCTIVVSSAECAKEVLKTHDLIFASRPPILASKIMSYDSMGIAFSPYGDYWRQLRKICALELLSSKRVQSFQPIREEELTKFIKRIASREGSPINLTKEILKTISTIVARTALGSKYRDHQKFISAVRKATEVAGGFDLGDLYPSAGWLQNISGLKSKIEQCHQQTDQIMQRIVDDHREAKLSVAQGQGEQVEDDLVDVLMKDEFGLSDNGIKAVILDIYGGGSETSSTTITWAMAEIIKDARVMKKVQAEVREVFGKEGQPNESDMENLKYLKCVVKETLRLHPPGPLLLPRECGEACEIKGYEIPTKSKIIINAWAIGRDPNHWTEAERFYPDRFIESGVDYKGNNFEYIPFGAGRRMCPGLTFGLTTVEFPLALLMYHFDWKAPNGIKNEDLDMTEAFGISVGRKHDLQLIPVTFRP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3649g00007 494 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PRINTS E-class P450 group I signature 177 195 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 FunFam Cytochrome P450 71D8 25 489 - -
Vium3649g00007 494 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Vium3649g00007 494 SUPERFAMILY Cytochrome P450 33 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 Gene3D Cytochrome P450 25 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00007 494 PANTHER CYTOCHROME P450 71B11-RELATED 16 490 - -
Vium3649g00007 494 CDD CYP71-like 63 485 - -
Vium3649g00007 494 Pfam Cytochrome P450 33 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3649g00007 Vium-Chr3649 46720 49021 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3649g00007 3 492 Cytochrome P450 AT3G26300 43.960 2.26e-144 422
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3649g00007 - K13267 gmx:100813216 815.839