Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3649g00006 ATGGCTGAACTTGTCCTCTATTTTTCAACTCTTATCTTCTTTTTCTTCTTAGTCTTCATAGTGAGAAAAATAGGAAACACAAAGAAAAAAGTTGAGGACACACCTTGTAACATACCCCATGGACCTAGAAAACTACCTATTATAGGAAATATACATTTTCTGTTATTCTCTCAACCCCATAGAAAATTAAGAGACCTGGCCTTAAAATATGGACCCTTGATGCATCTTCAACTGGGAGAAGTTTCTACTATTGTCATTTCATCCGCTGAGTGTGCTAAGGAAGTGATGAAAACCCATGATATTAACTTTGCCACAAGGCCTAAAGTCCTAGCTATTGATGTAATCTGTTACAACTGCACAGACATAGCTTTTGCTCCTTATGGACATTATTGGAGGCAGTTAAGAAAAATTTGCTTGTTGGAGCTTTTAAGCCTAAAACGTGTTAACTCATACCAGCCAATCAGAGAAGAGGAGCTCTTCAATCTTATCAAATGGATAGATGCACAGAAAGGATCACTGATCAACCTCACTGAAGCTGTTCTTTCATCAATTTATACAATTGCTTCAAGGTCTGCCTTTGGCAAGAAAAGCAAAGACCAAGAAAACTTTATATCAGTGGCTACAAAAATAATCAAAGTTACTGGAGGTTTTGACATTGGAGATTTCTTTCCTTCTGCTGTTTGGCTGCAACATGTCACTGGCATGAGGCACAAGCTTGAGAGGTTGCATCAACAAGCTGATCAGATAATGGAAAACATCATCAATGAGCATAAAGAGGCAAAGTCTAAGGCCAAAGATCACCAAAGTGAAACAACAGATCTTGTGGATGTTCTCATGCAGTATGAGGGTGATAGCAAGCAGGATTTTTCTTTAACAAGGAACAACATCAAGGCAATAATTCTGGACATTTTTGGTGCTGGCGGTGAGACATCATCAACAACCATAGATTGGGCGATGGCTGAAATGATGAAGAATTCAAGAGTAATGAAAAAAGCACAAGCTGAAGTTAGAGAGGTATTCAAATTGAAAGGAAGGGTTGATGAAAATTGCATCAATGAACTCAAATATTTGAAACTAGTTGTGAAAGAGACCTTGAGATTACACCCTCCAGCTCCTCTTTTGCTTCCAAGAGAATGTGGTCAAACATGTGAGATACATGGCTATAACATACCTGCCAAAAGCAAGGTCATTGTCAATGCTTGGGCAATTGGAAGAGATTCAAACTATTGGACTGAACCAGAGAGGTTTCATCCCGAGAGATTCATTGACAGCAGTATTGACTACAAAGGGAATAATTTTGAGTACATTCCTTTTGGAGCTGGAAGAAGGATATGCCCTGGAATCACATTTGCATCCAGAGTTATGGAACTGGCCCTTGCAATGTTGCTGTATCACTTTGATTGGAGGCTTCCATGTGGAATGATAAGTGAAGAATTGGACATGAGTGAAGACTTTGGAGTCACAGTTAGAAGAAAGCATGATCTGCTCTTGTTTGCTTTTCCTTATCTTCCTTTGCCTGTCTCATGA 1527 0.391 MAELVLYFSTLIFFFFLVFIVRKIGNTKKKVEDTPCNIPHGPRKLPIIGNIHFLLFSQPHRKLRDLALKYGPLMHLQLGEVSTIVISSAECAKEVMKTHDINFATRPKVLAIDVICYNCTDIAFAPYGHYWRQLRKICLLELLSLKRVNSYQPIREEELFNLIKWIDAQKGSLINLTEAVLSSIYTIASRSAFGKKSKDQENFISVATKIIKVTGGFDIGDFFPSAVWLQHVTGMRHKLERLHQQADQIMENIINEHKEAKSKAKDHQSETTDLVDVLMQYEGDSKQDFSLTRNNIKAIILDIFGAGGETSSTTIDWAMAEMMKNSRVMKKAQAEVREVFKLKGRVDENCINELKYLKLVVKETLRLHPPAPLLLPRECGQTCEIHGYNIPAKSKVIVNAWAIGRDSNYWTEPERFHPERFIDSSIDYKGNNFEYIPFGAGRRICPGITFASRVMELALAMLLYHFDWRLPCGMISEELDMSEDFGVTVRRKHDLLLFAFPYLPLPVS 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3649g00006 508 FunFam Cytochrome P450 71D8 31 499 - -
Vium3649g00006 508 Pfam Cytochrome P450 39 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 PANTHER OS08G0105600 PROTEIN 62 503 - -
Vium3649g00006 508 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 CDD CYP71-like 69 495 - -
Vium3649g00006 508 Gene3D Cytochrome P450 32 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3649g00006 508 Coils Coil 236 270 - -
Vium3649g00006 508 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Vium3649g00006 508 SUPERFAMILY Cytochrome P450 39 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3649g00006 Vium-Chr3649 43879 45612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3649g00006 11 497 Cytochrome P450 AT3G26310 41.566 6.69e-134 395
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3649g00006 - - gmx:100778572 812.372