Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3646g00001 ATGAGCAAAACTCACCCACATTGTCGACGTGACATCACGTGGATTTTACTCTTTCTGCTTCTTGCTCTTCTTCTTCCGTGCGTGGTTGATGGTGACGGCGACGGCGACGGCGATCGGTGTAAATGCAAAAGCGATAAAGAAGAAGGTGGAGAAAAGGTTGACAAGAATTTGGCCAAGAAGTACAAAATCGGAGCTCTTGTTTCGATTCTGGTTGCAAGTGCAGTTGGCGTCAGCCTTCCAATGCTCAGCAGAATTTTCCCCGCCTTGCATCCGGAGAAGGACTTCTTCTTCATGGTGAAGGCCTTCGCGGCTGGGGTCATATTATCCACCGGTTTCATTCATGTATTGCCAGATGCTTTTGAAAAGCTGACGCCTCCCAGTCTCTGTCATCATCCCTGGGACGATTTTCCCTTCGCCGGATTTGTGGCAATGGTGGCAGCCATCGGAACGCTTATGGTTGATTCTCTTGCGACTGCGTATTTTAAAAAGTCCTCGCTAAGCGCCATGGACCGAGTTGCTGAGGAAGAAGATCTGCATGAACATAATCGCCATGCAACTCATCATTCTCATTCTCATTCTCACGCTTCCATGTCTTCTCCTTCGACGAACCTCCTTCGCCATCGCGTTATTTCTCAGGTGCTGGAGCTGGGGATTGTGGTGCATTCTGTGATAATAGGGATCTCTCTGGGTGCATCTGAAGATCCTAAAACGATAAGACCTCTTATTGCTGCTTTAACTTTTCACCAATTTTTTGAAGGCATGGGGCTCGGTGGTTCCATCTCACAGGCAAAATTCAAGAGAGGAGCAGTTATAGTTATGGCATTGTTCTTTTCGCTGACGACACCTGTGGGGATTGCAATTGGTATGATAATTAGTGGTAGATACGAGAAAGAAAGTCCAACGGCTCTGATTGTGGAAGGTATTCTTAACGCAGCATCAGCAGGTATCTTGATTTACATGTCACTGGTGGACCTTCTTGCACCCGATTTAATGAATCCGAAGATCCAAGCAAGTATCAAGCTTCAGATCGGAGTTAACGCATCTTTGCTTATTGGGGCTGGCTGCATGTCACTTCTTGCAAAATGGGCCTAG 1092 0.4707 MSKTHPHCRRDITWILLFLLLALLLPCVVDGDGDGDGDRCKCKSDKEEGGEKVDKNLAKKYKIGALVSILVASAVGVSLPMLSRIFPALHPEKDFFFMVKAFAAGVILSTGFIHVLPDAFEKLTPPSLCHHPWDDFPFAGFVAMVAAIGTLMVDSLATAYFKKSSLSAMDRVAEEEDLHEHNRHATHHSHSHSHASMSSPSTNLLRHRVISQVLELGIVVHSVIIGISLGASEDPKTIRPLIAALTFHQFFEGMGLGGSISQAKFKRGAVIVMALFFSLTTPVGIAIGMIISGRYEKESPTALIVEGILNAASAGILIYMSLVDLLAPDLMNPKIQASIKLQIGVNASLLIGAGCMSLLAKWA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3646g00001 363 NCBIfam ZIP zinc/iron transport family 50 363 IPR004698 GO:0005385|GO:0016020|GO:0071577
Vium3646g00001 363 MobiDBLite consensus disorder prediction 172 200 - -
Vium3646g00001 363 PANTHER ZINC/IRON TRANSPORTER 59 356 - -
Vium3646g00001 363 Pfam ZIP Zinc transporter 61 360 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3646g00001 Vium-Chr3646 404 3381 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3646g00001 40 363 Inorganic Solute Cotransporters AT3G12750 54.925 3.37e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3646g00001 K14709 - rcu:8279565 407.527