Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3644g00005 ATGGTGCCTGTGTTGCAGTGTCTTGAAACTCTAAAAACTCATTTTTCTTATAATGCTGCACGAGAAAATATCCAAAGTTGTTCTAGAAAGAGGTGGGACCAATCAAATCTAATGTCCTCAGAGGAAAGTGACAGTTGCCTCAAGGATGCTTCAAAATTTCAACATGCTTTTGATGGTTCTGTTGGTTCAGATGGAATTGCATCCGTAGATCACACTGGAATAAAGTCTAATGAACTGTTCCACTTGAAGAAAGGGTTGCATGTAGATTATTCTGATGCCAACTTTAATGAAGTATTGAAATTAAACAATTTGGATAGTGTCTCAACTCAATTGCTTTTTAATATAGGAAAAAGGATCCTAAGTGATATATTTGAAAGGAAAAATGGAGATGTACCTCAGGCTCATCGTGCTGCATGCTTGTTGAGGAAAATTCTGCAAGTAATTGAGTTGCGCTTTTCGAATCAAGCTGAAAGCATGAAAAATCAAAACTATCATTTCAAAGCTCGTGAGGGAAAATATCAAACAAGAATACATGCACTTGAGACCTTGGCAGTAGGGACAACTGAAGAGAATGAGATTCTTTCAAGTTGGGTTCAGCAATTGAAGTACGATTTGCAGGCTGAACAAACTAAATTTGAGGAGAAGAAGAGACTTGAAGAGCAAGATTTTTCTCATTTAAAGAAAGAAAAAGTTCGTAGTGAAATTGAAATTTCTGCATTGAAGCAAGATTTGGAAATAGCCAAAAGAACACATGAAAAACATGTTTCAGAGTTAGAATTACTTGTTACTGAATCTAAAGCTGAATATGAAAAAAGGATAGAGGAACTTAAGCTTCATCTTGCAGATGCAAGAAAGCAAGTGAAGGAACTAGAGGCATTTTCAGAATCCAGATTTTTGAATTGGAAGAATAAAGAACATAGCTATCAAACTATCGTAAATTTCCAATTTGGAGTTTTCCAGGAGCTGAGAGCATCCATGAAGTCTGTCAAAGATGATGTAATAAAAACAAAAAGAAGCTACTTAGAGGAATTCAAGTACTTTGGAACCAAGTTGAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATGTAGTTCTAGCAGAAAATAGGAAATTGTATAATGAAGTTCAAGATTTGAAAGGTAATATAAGGGTGTATTGTCGTATTAGACCATTTCTTCCAGGGCAAAATCAAAGCCATACAACAATTGAGTTTGTTGGGGATGATGGAGAACTCGTTGTTAGCAATCCTCTTAAACATGGAAAGGAAAATCGTAAACTATTTAAATTTAACAAGGTTTTTGGTCAAGCAACAAGTCAAGAGGAAGTATTCAAGGACACTCAACCACTGATTCGATCTGTTCTTGATGGGTACAATGTTTGTATATTTGCCTATGGTCAAACTGGTTCAGGAAAGACATATACAATGAGCGGACCTGGCCTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAGACTAGGAGAAGCTCTATTGTTTATGAAGTTGGAGTTCAAATGGTTGAAATTTATAACGAACAAGTTCGTGATTTACTATCAAGCAATGGTCCTCAAAAGAGACTCGGGATTTGGAATACTGCCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTAAATTCTATGGCAGATGTCCTTGAGTTGATGAATACTGGGTTGATGAATCGAGCAACTAGTGCAACAGCCTTGAATGAAAGAAGTAGTCGATCACACAGTGTTCTCTCTGTTCATGTCCGAGGAACGGATTTGAAGACCAACACACTGTTGCGTGGATGTCTGCATCTTGTAGATCTTGCAGGAAGTGAAAGAGTGGACCGCTCTGAAGCAACTGGAGATAGGCTGAAGGAGGCTCAACATATAAATAAATCACTATCTGCACTTGGAGATGTGATATTTGCCCTATCACAAAAGAATTCACATGTGCCATATAGAAATAGTAAATTGACCCAACTTCTTCAGAGTTCGTTAGGCGGTCAAGCAAAAACCCTTATGTTTGTTCAGCTTAATCCTGATGTTGCTTCATTTTCTGAAACTGTAAGCACCTTGAAGTTTGCTGAAAGGGTTTCTGGCGTTGAGTTAGGCGCTGCTCGTAGCAACAAAGAGGGAAGGGATGTGAGAGAACTTATGGAGCAGTTGGTATCTCTCAAGGATGTTATTGGAAGGAAGGATGAAGAGATTGAGCAGTTACAGTTGCTCAAAGCAAATCAAAATGGTGCAAAGAATGGCATGATCTCAGTTAGACACAGGTCATCATCTCCAAGGAGACTCTCCGTAGGGACTCCCCGAAATAGCACAAGACGTTCGGGAATGAGCAGCCTTAGAGTGAATGGAAAGGCAGCTTCTGACATGGATAACTGCTCAGAATACAGTGATAAGCATTCTGAAGCTGGTTCTCATCAATCAATGGATGATTTCAGGAACAAGTCCAGCTCCCTTCGGTTGAAATTAGCCAGAGATGATATCAGTCAAAATTTCAATGAGGACACTGACCTATTAAGATTTGGAGATGCAGATTCGGAGGAGAGATTAAGTGACATATCTGATGGTGGTCTTTCAATGGGAACCGAAACCGAAGGCTCAATCAGTAGTATTGTGGAGTATACACTTTTCCCTGAACTCGAGAAGGCAGCTGAAGCGACACCAGTGAAGGACAGCAACAAAATCATTAATTTTCCAGCTGAAAGCACAGAAAAGCCAATTATGCCATCCAGAATTCCTAAAGCTGCTCAAGCCTCACAAAAAATGCGGAAAATACCTTCTAGGCTATCATTAAGCAAAACCTCCTCGAAGGCTCCGTCAAGTGTTAGAAAACCCATTGCCAGTAGCTCTTCTTCGGCGAAGCCCCTTAAACGTTGGCAATAG 2916 0.3947 MVPVLQCLETLKTHFSYNAARENIQSCSRKRWDQSNLMSSEESDSCLKDASKFQHAFDGSVGSDGIASVDHTGIKSNELFHLKKGLHVDYSDANFNEVLKLNNLDSVSTQLLFNIGKRILSDIFERKNGDVPQAHRAACLLRKILQVIELRFSNQAESMKNQNYHFKAREGKYQTRIHALETLAVGTTEENEILSSWVQQLKYDLQAEQTKFEEKKRLEEQDFSHLKKEKVRSEIEISALKQDLEIAKRTHEKHVSELELLVTESKAEYEKRIEELKLHLADARKQVKELEAFSESRFLNWKNKEHSYQTIVNFQFGVFQELRASMKSVKDDVIKTKRSYLEEFKYFGTKLKGLAEAAENYHVVLAENRKLYNEVQDLKGNIRVYCRIRPFLPGQNQSHTTIEFVGDDGELVVSNPLKHGKENRKLFKFNKVFGQATSQEEVFKDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPGLSSKSDWGVNYRALHDLFHISQTRRSSIVYEVGVQMVEIYNEQVRDLLSSNGPQKRLGIWNTAQPNGLAVPDASMHSVNSMADVLELMNTGLMNRATSATALNERSSRSHSVLSVHVRGTDLKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALSQKNSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASFSETVSTLKFAERVSGVELGAARSNKEGRDVRELMEQLVSLKDVIGRKDEEIEQLQLLKANQNGAKNGMISVRHRSSSPRRLSVGTPRNSTRRSGMSSLRVNGKAASDMDNCSEYSDKHSEAGSHQSMDDFRNKSSSLRLKLARDDISQNFNEDTDLLRFGDADSEERLSDISDGGLSMGTETEGSISSIVEYTLFPELEKAAEATPVKDSNKIINFPAESTEKPIMPSRIPKAAQASQKMRKIPSRLSLSKTSSKAPSSVRKPIASSSSSAKPLKRWQ 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3644g00005 971 PANTHER KINESIN-LIKE PROTEIN KLP-3 48 937 IPR027640 GO:0003777|GO:0007018
Vium3644g00005 971 MobiDBLite consensus disorder prediction 758 824 - -
Vium3644g00005 971 PRINTS Kinesin heavy chain signature 456 477 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00005 971 PRINTS Kinesin heavy chain signature 610 628 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00005 971 PRINTS Kinesin heavy chain signature 579 596 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00005 971 PRINTS Kinesin heavy chain signature 659 680 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00005 971 Coils Coil 230 257 - -
Vium3644g00005 971 Coils Coil 266 293 - -
Vium3644g00005 971 SMART kinesin_4 379 717 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00005 971 ProSiteProfiles Kinesin motor domain profile. 381 709 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00005 971 MobiDBLite consensus disorder prediction 916 971 - -
Vium3644g00005 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 381 747 IPR027417 -
Vium3644g00005 971 MobiDBLite consensus disorder prediction 803 824 - -
Vium3644g00005 971 Gene3D Kinesin motor domain 323 711 IPR036961 -
Vium3644g00005 971 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 323 711 - -
Vium3644g00005 971 MobiDBLite consensus disorder prediction 934 971 - -
Vium3644g00005 971 Pfam Kinesin motor domain 387 707 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00005 971 MobiDBLite consensus disorder prediction 758 793 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3644g00005 Vium-Chr3644 13065 20585 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3644g00005 369 743 Calmodulin-binding Proteins AT5G65930 41.910 7.49e-76 270