Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3644g00003 ATGCAGTGGGAGCAGGAGGGGTGGGGGAAAGGGGGAATTAACAACGGTAGTCAGCAGCTTCCGTCACTGGTGAAGTGGATAAATGCTGTGCTTCCTAACTTTAATCTGCCTTTAGATACTTCGGAGGACGAGTTGAGGGCACGGTTGAGGGATGGATCTGTGTTATGCAGCATTTTGGATAATCTGGTTCCTGGTTCGGTGAAGGGAAATGGTTCTTTGAATGAGCTAATCAGTGTGAAAAGGTTTCTGGTAGCTTTGGATGAATTGGGATTGTCTGGATTTGAATTGTCAGACCTACAGCAGGGATCCATGGTGCCTGTGTTGCAGTGTCTTGAAACTCTAAAAACTCATTTTTCTTATAATGCTGCACGAGAAAATATCCAAAGTTGTTCTAGAAAGAGGTGGGACCAATCAAATCTAATGTCCTCAGAGGAAAGTGACAGTTGCCTCAAGGATGCTTCAAAATTTCAACATGCTTTTGATGGTTCTGTTGGTTCAGATGGAATTGCATCCGTAGATCACACTGGAATAAAGTCTAATGAACTGTTCCACTTGAAGAAAGGGTTGCATGTAGATTATTCTGATGCCAACTTTAATGAAGTATTGAAATTAAACAATTTGGATAGTGTCTCAACTCAATTGCTTTTTAATATAGGAAAAAGGATCCTAAGTGATATATTTGAAAGGAAAAATGGAGATGTACCTCAGGCTCATCGTGCTGCATGCTTGTTGAGGAAAATTCTGCAAGTAATTGAGTTGCGCTTTTCGAATCAAGCTGAAAGCATGAAAAATCAAAACTATCATTTCAAAGCTCGTGAGGGAAAATATCAAACAAGAATACATGCACTTGAGACCTTGGCAGTAGGGACAACTGAAGAGAATGAGATTCTTTCAAGTTGGGTTCAGCAATTGAAGTACGATTTGCAGGCTGAACAAACTAAATTTGAGGAGAAGAAGAGACTTGAAGAGCAAGATTTTTCTCATTTAAAGAAAGAAAAAGTTCGTAGTGAAATTGAAATTTCTGCATTGAAGCAAGATTTGGAAATAGCCAAAAGAACACATGAAAAACATGTTTCAGAGTTAGAATTACTTGTTACTGAATCTAAAGCTGAATATGAAAAAAGGATAGAGGAACTTAAGCTTCATCTTGCAGATGCAAGAAAGCAAGTGAAGGAACTAGAGGCATTTTCAGAATCCAGATTTTTGAATTGGAAGAATAAAGAACATAGCTATCAAACTATCGTAAATTTCCAATTTGGAGTTTTCCAGGAGCTGAGAGCATCCATGAAGTCTGTCAAAGATGATGTAATAAAAACAAAAAGAAGCTACTTAGAGGAATTCAAGTACTTTGGAACCAAGTTGAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATGTAGTTCTAGCAGAAAATAGGAAATTGTATAATGAAGTTCAAGATTTGAAAGGTAATATAAGGGTGTATTGTCGTATTAGACCATTTCTTCCAGGGCAAAATCAAAGCCATACAACAATTGAGTTTGTTGGGGATGATGGAGAACTCGTTGTTAGCAATCCTCTTAAACATGGAAAGGAAAATCGTAAACTATTTAAATTTAACAAGGTTTTTGGTCAAGCAACAAGTCAAGAGGAAGTATTCAAGGACACTCAACCACTGATTCGATCTGTTCTTGATGGGTACAATGTTTGTATATTTGCCTATGGTCAAACTGGTTCAGGAAAGACATATACAATGAGCGGACCTGGCCTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAGACTAGGAGAAGCTCTATTGTTTATGAAGTTGGAGTTCAAATGGTTGAAATTTATAACGAACAAGTTCGTGATTTACTATCAAGCAATGGTCCTCAAAAGAGACTCGGGATTTGGAATACTGCCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTAAATTCTATGGCAGATGTCCTTGAGTTGATGAATACTGGGTTGATGAATCGAGCAACTAGTGCAACAGCCTTGAATGAAAGAAGTAGTCGATCACACAGTGTTCTCTCTGTTCATGTCCGAGGAACGGATTTGAAGACCAACACACTGTTGCGTGGATGTCTGCATCTTGTAGATCTTGCAGGAAGTGAAAGAGTGGACCGCTCTGAAGCAACTGGAGATAGGCTGAAGGAGGCTCAACATATAAATAAATCACTATCTGCACTTGGAGATGTGATATTTGCCCTATCACAAAAGAATTCACATGTGCCATATAGAAATAGTAAATTGACCCAACTTCTTCAGAGTTCGTTAGGCGGTCAAGCAAAAACCCTTATGTTTGTTCAGCTTAATCCTGATGTTGCTTCATTTTCTGAAACTGTAAGCACCTTGAAGTTTGCTGAAAGGGTTTCTGGCGTTGAGTTAGGCGCTGCTCGTAGCAACAAAGAGGGAAGGGATGTGAGAGAACTTATGGAGCAGTTGGTATCTCTCAAGGATGTTATTGGAAGGAAGGATGAAGAGATTGAGCAGTTACAGTTGCTCAAAGCAAATCAAAATGGTGCAAAGAATGGCATGATCTCAGTTAGACACAGGTCATCATCTCCAAGGAGACTCTCCGTAGGGACTCCCCGAAATAGCACAAGACGTTCGGGAATGAGCAGCCTTAGAGTGAATGGAAAGGCAGCTTCTGACATGGATAACTGCTCAGAATACAGTGATAAGCATTCTGAAGCTGGTTCTCATCAATCAATGGATGATTTCAGGAACAAGTCCAGCTCCCTTCGGTTGAAATTAGCCAGAGATGATATCAGTCAAAATTTCAATGAGGACACTGACCTATTAAGATTTGGAGATGCAGATTCGGAGGAGAGATTAAGTGACATATCTGATGGTGGTCTTTCAATGGGAACCGAAACCGAAGGCTCAATCAGTAGTATTGTGGAGTATACACTTTTCCCTGAACTCGAGAAGGCAGCTGAAGCGACACCAGTGAAGGACAGCAACAAAATCATTAATTTTCCAGCTGAAAGCACAGAAAAGCCAATTATGCCATCCAGAATTCCTAAAGCTGCTCAAGCCTCACAAAAAATGCGGACAATACCTTCTAGGCTATCATTAAGCAAAACCTCCTCGAAGGCTCCGTCAAGTGTTAGAAAACCCATTGCCAGTAGCTCTTCTTCGGCGAAGCCCCTTAAACGTTGGCAATAG 3225 0.4025 MQWEQEGWGKGGINNGSQQLPSLVKWINAVLPNFNLPLDTSEDELRARLRDGSVLCSILDNLVPGSVKGNGSLNELISVKRFLVALDELGLSGFELSDLQQGSMVPVLQCLETLKTHFSYNAARENIQSCSRKRWDQSNLMSSEESDSCLKDASKFQHAFDGSVGSDGIASVDHTGIKSNELFHLKKGLHVDYSDANFNEVLKLNNLDSVSTQLLFNIGKRILSDIFERKNGDVPQAHRAACLLRKILQVIELRFSNQAESMKNQNYHFKAREGKYQTRIHALETLAVGTTEENEILSSWVQQLKYDLQAEQTKFEEKKRLEEQDFSHLKKEKVRSEIEISALKQDLEIAKRTHEKHVSELELLVTESKAEYEKRIEELKLHLADARKQVKELEAFSESRFLNWKNKEHSYQTIVNFQFGVFQELRASMKSVKDDVIKTKRSYLEEFKYFGTKLKGLAEAAENYHVVLAENRKLYNEVQDLKGNIRVYCRIRPFLPGQNQSHTTIEFVGDDGELVVSNPLKHGKENRKLFKFNKVFGQATSQEEVFKDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPGLSSKSDWGVNYRALHDLFHISQTRRSSIVYEVGVQMVEIYNEQVRDLLSSNGPQKRLGIWNTAQPNGLAVPDASMHSVNSMADVLELMNTGLMNRATSATALNERSSRSHSVLSVHVRGTDLKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALSQKNSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASFSETVSTLKFAERVSGVELGAARSNKEGRDVRELMEQLVSLKDVIGRKDEEIEQLQLLKANQNGAKNGMISVRHRSSSPRRLSVGTPRNSTRRSGMSSLRVNGKAASDMDNCSEYSDKHSEAGSHQSMDDFRNKSSSLRLKLARDDISQNFNEDTDLLRFGDADSEERLSDISDGGLSMGTETEGSISSIVEYTLFPELEKAAEATPVKDSNKIINFPAESTEKPIMPSRIPKAAQASQKMRTIPSRLSLSKTSSKAPSSVRKPIASSSSSAKPLKRWQ 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3644g00003 1074 MobiDBLite consensus disorder prediction 906 927 - -
Vium3644g00003 1074 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 484 850 IPR027417 -
Vium3644g00003 1074 SUPERFAMILY Calponin-homology domain, CH-domain 22 118 IPR036872 -
Vium3644g00003 1074 Coils Coil 333 360 - -
Vium3644g00003 1074 PANTHER KINESIN-LIKE PROTEIN KLP-3 320 1027 IPR027640 GO:0003777|GO:0007018
Vium3644g00003 1074 MobiDBLite consensus disorder prediction 1034 1074 - -
Vium3644g00003 1074 Coils Coil 369 396 - -
Vium3644g00003 1074 Gene3D Kinesin motor domain 426 814 IPR036961 -
Vium3644g00003 1074 MobiDBLite consensus disorder prediction 1024 1074 - -
Vium3644g00003 1074 SMART ch_5 19 117 IPR001715 GO:0005515
Vium3644g00003 1074 ProSiteProfiles Calponin homology (CH) domain profile. 17 119 IPR001715 GO:0005515
Vium3644g00003 1074 ProSiteProfiles Kinesin motor domain profile. 484 812 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00003 1074 SMART kinesin_4 482 820 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00003 1074 Gene3D - 15 122 IPR036872 -
Vium3644g00003 1074 MobiDBLite consensus disorder prediction 861 927 - -
Vium3644g00003 1074 MobiDBLite consensus disorder prediction 861 896 - -
Vium3644g00003 1074 PRINTS Kinesin heavy chain signature 559 580 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00003 1074 PRINTS Kinesin heavy chain signature 762 783 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00003 1074 PRINTS Kinesin heavy chain signature 713 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00003 1074 PRINTS Kinesin heavy chain signature 682 699 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00003 1074 Pfam Kinesin motor domain 490 810 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00003 1074 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 426 814 - -
Vium3644g00003 1074 Pfam Calponin homology (CH) domain 22 118 IPR001715 GO:0005515
Vium3644g00003 1074 FunFam kinesin-like protein KIN-14J isoform X2 12 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3644g00003 Vium-Chr3644 3897 12799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3644g00003 472 846 Calmodulin-binding Proteins AT5G65930 41.910 1.96e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3644g00003 K10406 - gmx:100812813 1821.98