Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3644g00002 ATGCAGTGGGAGCAGGAGGGGTGGGGGAAAGGGGGAATTAACAACGGTAATGGGTTTCATCGTGCAGGTAGTCAGCAGCTTCCGTCACTGGTGAAGTGGATAAATGCTGTGCTTCCTAACTTTAATCTGCCTTTAGATACTTCGGAGGACGAGTTGAGGGCACGGTTGAGGGATGGATCTGTGTTATGCAGCATTTTGGATAATCTGGTTCCTGGTTCGGTGAAGGGAAATGGTTCTTTGAATGAGCTAATCAGTGTGAAAAGGTTTCTGGTAGCTTTGGATGAATTGGGATTGTCTGGATTTGAATTGTCAGACCTACAGCAGGGATCCATGGTGCCTGTGTTGCAGTGTCTTGAAACTCTAAAAACTCATTTTTCTTATAATGCTGCACGAGAAAATATCCAAAGTTGTTCTAGAAAGAGGTGGGACCAATCAAATCTAATGTCCTCAGAGGAAAGTGACAGTTGCCTCAAGGATGCTTCAAAATTTCAACATGCTTTTGATGGTTCTGTTGGTTCAGATGGAATTGCATCCGTAGATCACACTGGAATAAAGTCTAATGAACTGTTCCACTTGAAGAAAGGGTTGCATGTAGATTATTCTGATGCCAACTTTAATGAAGTATTGAAATTAAACAATTTGGATAGTGTCTCAACTCAATTGCTTTTTAATATAGGAAAAAGGATCCTAAGTGATATATTTGAAAGGAAAAATGGAGATGTACCTCAGGCTCATCGTGCTGCATGCTTGTTGAGGAAAATTCTGCAAGTAATTGAGTTGCGCTTTTCGAATCAAGCTGAAAGCATGAAAAATCAAAACTATCATTTCAAAGCTCGTGAGGGAAAATATCAAACAAGAATACATGCACTTGAGACCTTGGCAGTAGGGACAACTGAAGAGAATGAGATTCTTTCAAGTTGGGTTCAGCAATTGAAGGCTGAACAAACTAAATTTGAGGAGAAGAAGAGACTTGAAGAGCAAGATTTTTCTCATTTAAAGAAAGAAAAAGTTCGTAGTGAAATTGAAATTTCTGCATTGAAGCAAGATTTGGAAATAGCCAAAAGAACACATGAAAAACATGTTTCAGAGTTAGAATTACTTGTTACTGAATCTAAAGCTGAATATGAAAAAAGGATAGAGGAACTTAAGCTTCATCTTGCAGATGCAAGAAAGCAAGTGAAGGAACTAGAGGCATTTTCAGAATCCAGATTTTTGAATTGGAAGAATAAAGAACATAGCTATCAAACTATCGTAAATTTCCAATTTGGAGTTTTCCAGGAGCTGAGAGCATCCATGAAGTCTGTCAAAGATGATGTAATAAAAACAAAAAGAAGCTACTTAGAGGAATTCAAGTACTTTGGAACCAAGTTGAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATGTAGTTCTAGCAGAAAATAGGAAATTGTATAATGAAGTTCAAGATTTGAAAGGTAATATAAGGGTGTATTGTCGTATTAGACCATTTCTTCCAGGGCAAAATCAAAGCCATACAACAATTGAGTTTGTTGGGGATGATGGAGAACTCGTTGTTAGCAATCCTCTTAAACATGGAAAGGAAAATCGTAAACTATTTAAATTTAACAAGGTTTTTGGTCAAGCAACAAGTCAAGAGGAAGTATTCAAGGACACTCAACCACTGATTCGATCTGTTCTTGATGGGTACAATGTTTGTATATTTGCCTATGGTCAAACTGGTTCAGGAAAGACATATACAATGAGCGGACCTGGCCTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAGACTAGGAGAAGCTCTATTGTTTATGAAGTTGGAGTTCAAATGGTTGAAATTTATAACGAACAAGTTCGTGATTTACTATCAAGCAATGGTCCTCAAAAGAGACTCGGGATTTGGAATACTGCCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTAAATTCTATGGCAGATGTCCTTGAGTTGATGAATACTGGGTTGATGAATCGAGCAACTAGTGCAACAGCCTTGAATGAAAGAAGTAGTCGATCACACAGTGTTCTCTCTGTTCATGTCCGAGGAACGGATTTGAAGACCAACACACTGTTGCGTGGATGTCTGCATCTTGTAGATCTTGCAGGAAGTGAAAGAGTGGACCGCTCTGAAGCAACTGGAGATAGGCTGAAGGAGGCTCAACATATAAATAAATCACTATCTGCACTTGGAGATGTGATATTTGCCCTATCACAAAAGAATTCACATGTGCCATATAGAAATAGTAAATTGACCCAACTTCTTCAGAGTTCGTTAGGCGGTCAAGCAAAAACCCTTATGTTTGTTCAGCTTAATCCTGATGTTGCTTCATTTTCTGAAACTGTAAGCACCTTGAAGTTTGCTGAAAGGGTTTCTGGCGTTGAGTTAGGCGCTGCTCGTAGCAACAAAGAGGGAAGGGATGTGAGAGAACTTATGGAGCAGTTGGTATCTCTCAAGGATGTTATTGGAAGGAAGGATGAAGAGATTGAGCAGTTACAGTTGCTCAAAGCAAATCAAAATGGTGCAAAGAATGGCATGATCTCAGTTAGACACAGGTCATCATCTCCAAGGAGACTCTCCGTAGGGACTCCCCGAAATAGCACAAGACGTTCGGGAATGAGCAGCCTTAGAGTGAATGGAAAGGCAGCTTCTGACATGGATAACTGCTCAGAATACAGTGATAAGCATTCTGAAGCTGGTTCTCATCAATCAATGGATGATTTCAGGAACAAGTCCAGCTCCCTTCGGTTGAAATTAGCCAGAGATGATATCAGTCAAAATTTCAATGAGGACACTGACCTATTAAGATTTGGAGATGCAGATTCGGAGGAGAGATTAAGTGACATATCTGATGGTGGTCTTTCAATGGGAACCGAAACCGAAGGCTCAATCAGTAGTATTGTGGAGTATACACTTTTCCCTGAACTCGAGAAGGCAGCTGAAGCGACACCAGTGAAGGACAGCAACAAAATCATTAATTTTCCAGCTGAAAGCACAGAAAAGCCAATTATGCCATCCAGAATTCCTAAAGCTGCTCAAGCCTCACAAAAAATGCGGACAATACCTTCTAGGCTATCATTAAGCAAAACCTCCTCGAAGGCTCCGTCAAGTGTTAGAAAACCCATTGCCAGTAGCTCTTCTTCGGCGAAGCCCCTTAAACGTTGGCAATAG 3234 0.4029 MQWEQEGWGKGGINNGNGFHRAGSQQLPSLVKWINAVLPNFNLPLDTSEDELRARLRDGSVLCSILDNLVPGSVKGNGSLNELISVKRFLVALDELGLSGFELSDLQQGSMVPVLQCLETLKTHFSYNAARENIQSCSRKRWDQSNLMSSEESDSCLKDASKFQHAFDGSVGSDGIASVDHTGIKSNELFHLKKGLHVDYSDANFNEVLKLNNLDSVSTQLLFNIGKRILSDIFERKNGDVPQAHRAACLLRKILQVIELRFSNQAESMKNQNYHFKAREGKYQTRIHALETLAVGTTEENEILSSWVQQLKAEQTKFEEKKRLEEQDFSHLKKEKVRSEIEISALKQDLEIAKRTHEKHVSELELLVTESKAEYEKRIEELKLHLADARKQVKELEAFSESRFLNWKNKEHSYQTIVNFQFGVFQELRASMKSVKDDVIKTKRSYLEEFKYFGTKLKGLAEAAENYHVVLAENRKLYNEVQDLKGNIRVYCRIRPFLPGQNQSHTTIEFVGDDGELVVSNPLKHGKENRKLFKFNKVFGQATSQEEVFKDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPGLSSKSDWGVNYRALHDLFHISQTRRSSIVYEVGVQMVEIYNEQVRDLLSSNGPQKRLGIWNTAQPNGLAVPDASMHSVNSMADVLELMNTGLMNRATSATALNERSSRSHSVLSVHVRGTDLKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALSQKNSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASFSETVSTLKFAERVSGVELGAARSNKEGRDVRELMEQLVSLKDVIGRKDEEIEQLQLLKANQNGAKNGMISVRHRSSSPRRLSVGTPRNSTRRSGMSSLRVNGKAASDMDNCSEYSDKHSEAGSHQSMDDFRNKSSSLRLKLARDDISQNFNEDTDLLRFGDADSEERLSDISDGGLSMGTETEGSISSIVEYTLFPELEKAAEATPVKDSNKIINFPAESTEKPIMPSRIPKAAQASQKMRTIPSRLSLSKTSSKAPSSVRKPIASSSSSAKPLKRWQ 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3644g00002 1077 MobiDBLite consensus disorder prediction 864 899 - -
Vium3644g00002 1077 Pfam Kinesin motor domain 493 813 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00002 1077 Gene3D - 22 129 IPR036872 -
Vium3644g00002 1077 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 429 817 - -
Vium3644g00002 1077 SMART ch_5 26 124 IPR001715 GO:0005515
Vium3644g00002 1077 SUPERFAMILY Calponin-homology domain, CH-domain 27 125 IPR036872 -
Vium3644g00002 1077 MobiDBLite consensus disorder prediction 909 930 - -
Vium3644g00002 1077 Coils Coil 372 399 - -
Vium3644g00002 1077 PRINTS Kinesin heavy chain signature 685 702 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00002 1077 PRINTS Kinesin heavy chain signature 716 734 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00002 1077 PRINTS Kinesin heavy chain signature 562 583 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00002 1077 PRINTS Kinesin heavy chain signature 765 786 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00002 1077 SMART kinesin_4 485 823 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00002 1077 Coils Coil 308 328 - -
Vium3644g00002 1077 MobiDBLite consensus disorder prediction 1030 1077 - -
Vium3644g00002 1077 FunFam kinesin-like protein KIN-14J isoform X2 20 129 - -
Vium3644g00002 1077 Gene3D Kinesin motor domain 429 817 IPR036961 -
Vium3644g00002 1077 Pfam Calponin homology (CH) domain 29 125 IPR001715 GO:0005515
Vium3644g00002 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 853 IPR027417 -
Vium3644g00002 1077 ProSiteProfiles Calponin homology (CH) domain profile. 24 126 IPR001715 GO:0005515
Vium3644g00002 1077 ProSiteProfiles Kinesin motor domain profile. 487 815 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00002 1077 PANTHER KINESIN-LIKE PROTEIN KLP-3 321 1030 IPR027640 GO:0003777|GO:0007018
Vium3644g00002 1077 MobiDBLite consensus disorder prediction 864 930 - -
Vium3644g00002 1077 Coils Coil 336 363 - -
Vium3644g00002 1077 MobiDBLite consensus disorder prediction 1037 1077 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3644g00002 Vium-Chr3644 3897 12799 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3644g00002 475 849 Calmodulin-binding Proteins AT5G65930 41.910 2.08e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3644g00002 K10406 - gmx:100812813 1825.06