Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3644g00001 ATGCAGTGGGAGCAGGAGGGGTGGGGGAAAGGGGGAATTAACAACGGTAATGGGTTTCATCGTGCAGGTAGTCAGCAGCTTCCGTCACTGGTGAAGTGGATAAATGCTGTGCTTCCTAACTTTAATCTGCCTTTAGATACTTCGGAGGACGAGTTGAGGGCACGGTTGAGGGATGGATCTGTGTTATGCAGCATTTTGGATAATCTGGTTCCTGGTTCGGTGAAGGGAAATGGTTCTTTGAATGAGCTAATCAGTGTGAAAAGGTTTCTGGTAGCTTTGGATGAATTGGGATTGTCTGGATTTGAATTGTCAGACCTACAGCAGGGATCCATGGTGCCTGTGTTGCAGTGTCTTGAAACTCTAAAAACTCATTTTTCTTATAATGCTGCACGAGAAAATATCCAAAGTTGTTCTAGAAAGAGGTGGGACCAATCAAATCTAATGTCCTCAGAGGAAAGTGACAGTTGCCTCAAGGATGCTTCAAAATTTCAACATGCTTTTGATGGTTCTGTTGGTTCAGATGGAATTGCATCCGTAGATCACACTGGAATAAAGTCTAATGAACTGTTCCACTTGAAGAAAGGGTTGCATGTAGATTATTCTGATGCCAACTTTAATGAAGTATTGAAATTAAACAATTTGGATAGTGTCTCAACTCAATTGCTTTTTAATATAGGAAAAAGGATCCTAAGTGATATATTTGAAAGGAAAAATGGAGATGTACCTCAGGCTCATCGTGCTGCATGCTTGTTGAGGAAAATTCTGCAAGTAATTGAGTTGCGCTTTTCGAATCAAGCTGAAAGCATGAAAAATCAAAACTATCATTTCAAAGCTCGTGAGGGAAAATATCAAACAAGAATACATGCACTTGAGACCTTGGCAGTAGGGACAACTGAAGAGAATGAGATTCTTTCAAGTTGGGTTCAGCAATTGAAGTACGATTTGCAGGCTGAACAAACTAAATTTGAGGAGAAGAAGAGACTTGAAGAGCAAGATTTTTCTCATTTAAAGAAAGAAAAAGTTCGTAGTGAAATTGAAATTTCTGCATTGAAGCAAGATTTGGAAATAGCCAAAAGAACACATGAAAAACATGTTTCAGAGTTAGAATTACTTGTTACTGAATCTAAAGCTGAATATGAAAAAAGGATAGAGGAACTTAAGCTTCATCTTGCAGATGCAAGAAAGCAAGTGAAGGAACTAGAGGCATTTTCAGAATCCAGATTTTTGAATTGGAAGAATAAAGAACATAGCTATCAAACTATCGTAAATTTCCAATTTGGAGTTTTCCAGGAGCTGAGAGCATCCATGAAGTCTGTCAAAGATGATGTAATAAAAACAAAAAGAAGCTACTTAGAGGAATTCAAGTACTTTGGAACCAAGTTGAAAGGTCTAGCTGAGGCTGCTGAAAATTATCATGTAGTTCTAGCAGAAAATAGGAAATTGTATAATGAAGTTCAAGATTTGAAAGGTAATATAAGGGTGTATTGTCGTATTAGACCATTTCTTCCAGGGCAAAATCAAAGCCATACAACAATTGAGTTTGTTGGGGATGATGGAGAACTCGTTGTTAGCAATCCTCTTAAACATGGAAAGGAAAATCGTAAACTATTTAAATTTAACAAGGTTTTTGGTCAAGCAACAAGTCAAGAGGAAGTATTCAAGGACACTCAACCACTGATTCGATCTGTTCTTGATGGGTACAATGTTTGTATATTTGCCTATGGTCAAACTGGTTCAGGAAAGACATATACAATGAGCGGACCTGGCCTATCATCAAAATCAGATTGGGGAGTCAACTATCGGGCACTTCATGATCTTTTCCATATCTCCCAGACTAGGAGAAGCTCTATTGTTTATGAAGTTGGAGTTCAAATGGTTGAAATTTATAACGAACAAGTTCGTGATTTACTATCAAGCAATGGTCCTCAAAAGAGACTCGGGATTTGGAATACTGCCCAACCAAATGGGTTGGCTGTTCCTGATGCAAGTATGCATTCTGTAAATTCTATGGCAGATGTCCTTGAGTTGATGAATACTGGGTTGATGAATCGAGCAACTAGTGCAACAGCCTTGAATGAAAGAAGTAGTCGATCACACAGTGTTCTCTCTGTTCATGTCCGAGGAACGGATTTGAAGACCAACACACTGTTGCGTGGATGTCTGCATCTTGTAGATCTTGCAGGAAGTGAAAGAGTGGACCGCTCTGAAGCAACTGGAGATAGGCTGAAGGAGGCTCAACATATAAATAAATCACTATCTGCACTTGGAGATGTGATATTTGCCCTATCACAAAAGAATTCACATGTGCCATATAGAAATAGTAAATTGACCCAACTTCTTCAGAGTTCGTTAGGCGGTCAAGCAAAAACCCTTATGTTTGTTCAGCTTAATCCTGATGTTGCTTCATTTTCTGAAACTGTAAGCACCTTGAAGTTTGCTGAAAGGGTTTCTGGCGTTGAGTTAGGCGCTGCTCGTAGCAACAAAGAGGGAAGGGATGTGAGAGAACTTATGGAGCAGTTGGTATCTCTCAAGGATGTTATTGGAAGGAAGGATGAAGAGATTGAGCAGTTACAGTTGCTCAAAGCAAATCAAAATGGTGCAAAGAATGGCATGATCTCAGTTAGACACAGGTCATCATCTCCAAGGAGACTCTCCGTAGGGACTCCCCGAAATAGCACAAGACGTTCGGGAATGAGCAGCCTTAGAGTGAATGGAAAGGCAGCTTCTGACATGGATAACTGCTCAGAATACAGTGATAAGCATTCTGAAGCTGGTTCTCATCAATCAATGGATGATTTCAGGAACAAGTCCAGCTCCCTTCGGTTGAAATTAGCCAGAGATGATATCAGTCAAAATTTCAATGAGGACACTGACCTATTAAGATTTGGAGATGCAGATTCGGAGGAGAGATTAAGTGACATATCTGATGGTGGTCTTTCAATGGGAACCGAAACCGAAGGCTCAATCAGTAGTATTGTGGAGTATACACTTTTCCCTGAACTCGAGAAGGCAGCTGAAGCGACACCAGTGAAGGACAGCAACAAAATCATTAATTTTCCAGCTGAAAGCACAGAAAAGCCAATTATGCCATCCAGAATTCCTAAAGCTGCTCAAGCCTCACAAAAAATGCGGACAATACCTTCTAGGCTATCATTAAGCAAAACCTCCTCGAAGGCTCCGTCAAGTGTTAGAAAACCCATTGCCAGTAGCTCTTCTTCGGCGAAGCCCCTTAAACGTTGGCAATAG 3246 0.403 MQWEQEGWGKGGINNGNGFHRAGSQQLPSLVKWINAVLPNFNLPLDTSEDELRARLRDGSVLCSILDNLVPGSVKGNGSLNELISVKRFLVALDELGLSGFELSDLQQGSMVPVLQCLETLKTHFSYNAARENIQSCSRKRWDQSNLMSSEESDSCLKDASKFQHAFDGSVGSDGIASVDHTGIKSNELFHLKKGLHVDYSDANFNEVLKLNNLDSVSTQLLFNIGKRILSDIFERKNGDVPQAHRAACLLRKILQVIELRFSNQAESMKNQNYHFKAREGKYQTRIHALETLAVGTTEENEILSSWVQQLKYDLQAEQTKFEEKKRLEEQDFSHLKKEKVRSEIEISALKQDLEIAKRTHEKHVSELELLVTESKAEYEKRIEELKLHLADARKQVKELEAFSESRFLNWKNKEHSYQTIVNFQFGVFQELRASMKSVKDDVIKTKRSYLEEFKYFGTKLKGLAEAAENYHVVLAENRKLYNEVQDLKGNIRVYCRIRPFLPGQNQSHTTIEFVGDDGELVVSNPLKHGKENRKLFKFNKVFGQATSQEEVFKDTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPGLSSKSDWGVNYRALHDLFHISQTRRSSIVYEVGVQMVEIYNEQVRDLLSSNGPQKRLGIWNTAQPNGLAVPDASMHSVNSMADVLELMNTGLMNRATSATALNERSSRSHSVLSVHVRGTDLKTNTLLRGCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALSQKNSHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDVASFSETVSTLKFAERVSGVELGAARSNKEGRDVRELMEQLVSLKDVIGRKDEEIEQLQLLKANQNGAKNGMISVRHRSSSPRRLSVGTPRNSTRRSGMSSLRVNGKAASDMDNCSEYSDKHSEAGSHQSMDDFRNKSSSLRLKLARDDISQNFNEDTDLLRFGDADSEERLSDISDGGLSMGTETEGSISSIVEYTLFPELEKAAEATPVKDSNKIINFPAESTEKPIMPSRIPKAAQASQKMRTIPSRLSLSKTSSKAPSSVRKPIASSSSSAKPLKRWQ 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3644g00001 1081 MobiDBLite consensus disorder prediction 868 903 - -
Vium3644g00001 1081 Pfam Kinesin motor domain 497 817 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00001 1081 Pfam Calponin homology (CH) domain 29 125 IPR001715 GO:0005515
Vium3644g00001 1081 SUPERFAMILY Calponin-homology domain, CH-domain 27 125 IPR036872 -
Vium3644g00001 1081 Gene3D - 22 129 IPR036872 -
Vium3644g00001 1081 SMART ch_5 26 124 IPR001715 GO:0005515
Vium3644g00001 1081 PANTHER KINESIN-LIKE PROTEIN KLP-3 32 1034 IPR027640 GO:0003777|GO:0007018
Vium3644g00001 1081 PRINTS Kinesin heavy chain signature 689 706 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00001 1081 PRINTS Kinesin heavy chain signature 566 587 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00001 1081 PRINTS Kinesin heavy chain signature 769 790 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00001 1081 PRINTS Kinesin heavy chain signature 720 738 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00001 1081 SMART kinesin_4 489 827 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00001 1081 MobiDBLite consensus disorder prediction 913 934 - -
Vium3644g00001 1081 MobiDBLite consensus disorder prediction 1031 1081 - -
Vium3644g00001 1081 Coils Coil 376 403 - -
Vium3644g00001 1081 Coils Coil 340 367 - -
Vium3644g00001 1081 ProSiteProfiles Kinesin motor domain profile. 491 819 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vium3644g00001 1081 FunFam kinesin-like protein KIN-14J isoform X2 20 129 - -
Vium3644g00001 1081 Gene3D Kinesin motor domain 433 821 IPR036961 -
Vium3644g00001 1081 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 491 857 IPR027417 -
Vium3644g00001 1081 ProSiteProfiles Calponin homology (CH) domain profile. 24 126 IPR001715 GO:0005515
Vium3644g00001 1081 MobiDBLite consensus disorder prediction 868 934 - -
Vium3644g00001 1081 FunFam p-loop containing nucleoside triphosphate hydrolases superfamily protein 433 821 - -
Vium3644g00001 1081 MobiDBLite consensus disorder prediction 1041 1081 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3644g00001 Vium-Chr3644 3897 12799 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3644g00001 436 853 Calmodulin-binding Proteins AT5G65930 39.286 2.04e-75 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3644g00001 K10406 - gmx:100812813 1836.23