Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium363g00001 ATGGCTTCAAGCTCTCTCAGCAAGCAAAAGCCTTCTGATTCCTCCTGGACTCCAAAGCAGAACAAGCTGTTTGAAAAAGCACTTGCAAAATATGACAAGGATACCCCTGATCGCTGGCAGAATGTGGCTGCAGCAGTTGGTGACAAATCCCCTGATGAAGTTAAGAAACACTATGAGATTCTCTTGGAGGATCTCAGACACATAGAGTCTGGCCGTGTTCCTCTCCCCAAATACAGGTCCACCGCAACCACCACCACCACCAATGTTGATGATGAAGACAAGCTTCTGAAGTATCTTAAGCTGAATTGA 309 0.4628 MASSSLSKQKPSDSSWTPKQNKLFEKALAKYDKDTPDRWQNVAAAVGDKSPDEVKKHYEILLEDLRHIESGRVPLPKYRSTATTTTTNVDDEDKLLKYLKLN 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium363g00001 102 SMART sant 12 64 IPR001005 -
Vium363g00001 102 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Vium363g00001 102 MobiDBLite consensus disorder prediction 1 20 - -
Vium363g00001 102 CDD SANT 15 62 IPR001005 -
Vium363g00001 102 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Vium363g00001 102 FunFam Transcription factor SRM1 8 75 - -
Vium363g00001 102 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Vium363g00001 102 Gene3D - 7 75 - -
Vium363g00001 102 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 89 IPR044636 GO:0003700
Vium363g00001 102 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium363g00001 Vium-Chr363 5710 7386 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Vium363g00001 Myb_DNA-binding 2.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium363g00001 - - gmx:100798314 149.058