Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3631g00006 ATGTTGGCTGGGTGTTCTAGTTCGACATTGTTGTCACCGAGCCACAGATTGAGGAGCGAAGCACCAGCACCGTTTCAAGCCTGCCATTTCCCGCGACCTTCCATGAGCACGCAGAGGTTGGATTTGCCATGTTCTACCTTCACCCGCAAAGACGGCTCTTCACGCTCGCAGCCCCTCAGGCCAGTGGGGCTCTCGGTGGAGAAACCCATAGAAGCCAAGACCAGCACATGTTCTCTCAAGCACAACATTCGACTCCCACCTTTGGCCATCACAGCTGCAGCACCATTGGTTGAAGAGTCCATCAAGGACAAGAGTTTGAAAAGGCTCGCGGAGCACGATGAGTCCTTCACCAACGTACCCAAGAGGAAAAAGGGTATCACGGAGTTTGACAATTCCGGTGATAACTTTTGGTTTCAGCCTGGCGTTGAGGGTAACACTTTAGGAGGGCTTAACAACACTTCACTTGCTTTCTCCCCGGAGGAAGAGACGGTTTGTTTTGTTCCTTCTGAACTGGTGTCTCATTCTGCACCTTTTCCCTTAAACCCGTGGCTGGAATCGTGTGTAACAAAGATCACCAACTTCGGTGAGGGTAGCCACCGTCCTCGCCAGCATCACAACGACCATGCAACTGAAGGGTCGGTCTCCAACGCTTCTTCTGAGAGCCAAAGCCTGAGGCTAAACGAGAACGCGTCAGATCATGAAGTGGGAAACGGTTCGGGAAATCCTTACCGTCATCACGAGGTGGAGACAGGGGAAGAAGATGATCATCACGGGTTGGAACTCGTTAGCTTGCTCACTGGCTGCGTGGATGCCATTGGATCAAGAAACGTAGCTGCTATAAACCAGTTCATCGCAAAATTAGGTGATCTTGCATCTCCAAGGGGAACCCCCATAAGCCGCATATGCGCTTATTTCACAGAAGCCTTGGCCATCAGAGTAACAAGGCTTTGGCCTCATGTTTTTCACATCACCACCACTTCCCGAGACATGGTGGAGGATGACGAAACCGGAACTGCACTGAGGCTTCTCAACCAGGTGACCCCAATTCCAAAGTATATCCATTTCACATCAAACGAGATGCTGCTGAGGGCGTTTGAAGGAAAAGACAGAGTTCACATAATAGACTTCGACATCAAGCAAGGTCTTCAATGGCCAAGCTTGTTCCAGAGCCTAGCGTCGAGACCACACCCTCCGAGTCACGTGAGAATCACGGGGATAGGAGAATCAAAGCAAGAGCTAAACGAAACCGGAGACAGACTCGCGGGCTTCGCGGAAGCGCTGAACCTCCCCTTCGAGTTCCACCCCGTCGTGGACAGACTCGAAGACGTGAGGCTGTGGATGCTCCACGTGAAGGAGCAGGAAACGGTGGCCGTGAACTGCATTTTGCAGCTGCACAAGACGCTTTACGACGGAAGCGGAGGAGCTTTGAGGGACTTCCTGGGACTGATCCGCAGCACGAATCCGAACGTGGTTGTGGTGGCCGAACAGGAAGCAGAACACAACGAGGCAAGGCTGGAAGCAAGGGTGTGCAAGTCGTTGAAGTATTACTCAGCGTTGTTTGATTGCATCGAGGAGAGTGGGGTGGCGCAAGAGAGTGCAGTGAGGGTTAAGATAGAGGAGATGTACGGCAGGGAGATAAAAAACATGGTGGCATGTGAAGGGAGGGAGAGGTTGGAGAGACACGAGAGTTTCGGGAATTGGAGGAGGATGCTGGTGGAGCAAGGAGGGTTGAGATGTTTGGGAGTTTCTGAGAGGGAAATGAGTCAGAGCCAGTTGCTGTTGAAGATGTATTCTTGTGAGAGTTACAGTGTAAAGAAGGTGGAGATTGAAGGAGCAACAGGGGTTACTCTTAGTTGGCTTGAGCAACCTTTGTACACTGTTTCAGCTTGGGTTCCTGTTGATGTTGCGGGTACATCGTCCTCTTTTTCTCACCCAACTTGA 1941 0.5152 MLAGCSSSTLLSPSHRLRSEAPAPFQACHFPRPSMSTQRLDLPCSTFTRKDGSSRSQPLRPVGLSVEKPIEAKTSTCSLKHNIRLPPLAITAAAPLVEESIKDKSLKRLAEHDESFTNVPKRKKGITEFDNSGDNFWFQPGVEGNTLGGLNNTSLAFSPEEETVCFVPSELVSHSAPFPLNPWLESCVTKITNFGEGSHRPRQHHNDHATEGSVSNASSESQSLRLNENASDHEVGNGSGNPYRHHEVETGEEDDHHGLELVSLLTGCVDAIGSRNVAAINQFIAKLGDLASPRGTPISRICAYFTEALAIRVTRLWPHVFHITTTSRDMVEDDETGTALRLLNQVTPIPKYIHFTSNEMLLRAFEGKDRVHIIDFDIKQGLQWPSLFQSLASRPHPPSHVRITGIGESKQELNETGDRLAGFAEALNLPFEFHPVVDRLEDVRLWMLHVKEQETVAVNCILQLHKTLYDGSGGALRDFLGLIRSTNPNVVVVAEQEAEHNEARLEARVCKSLKYYSALFDCIEESGVAQESAVRVKIEEMYGREIKNMVACEGRERLERHESFGNWRRMLVEQGGLRCLGVSEREMSQSQLLLKMYSCESYSVKKVEIEGATGVTLSWLEQPLYTVSAWVPVDVAGTSSSFSHPT 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3631g00006 646 MobiDBLite consensus disorder prediction 195 255 - -
Vium3631g00006 646 MobiDBLite consensus disorder prediction 210 236 - -
Vium3631g00006 646 ProSiteProfiles GRAS family profile. 252 631 IPR005202 -
Vium3631g00006 646 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 217 626 IPR005202 -
Vium3631g00006 646 Pfam GRAS domain family 261 630 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3631g00006 Vium-Chr3631 55538 58794 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3631g00006 1 631 GRAS Transcription Factor Family AT1G63100 55.895 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vium3631g00006 GRAS 7.2e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3631g00006 - - gmx:100786173 1014.22