Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium362g00023 ATGGGAGTTGAAAAAGAAGGGACGAAAGGTGGAGGAGGTTATGTTGGTGGTTTTTTCCAGTTGTTTGACTGGACGTCGAAGTCCCGTAAGAAATTATTTGCGGCCAAGCCAGATTTGCCTGAGACTTTAAAACAGGGAAGAAGAGTTGATTACAATGTGGCAATGCCAATGACACAGTCCTCCTATCTGGTTGATGAAGATGAAAGTGGTGTTGGGGCAAGTCTAAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAACATTTGGTACAAGGGCTCCTAGTGTTGTTGCCAGGCTTATGGGATTAGATTCCTTGCCTTCTTCAAGTTTTTCTGATCCTTATGCTACCCCATATTTTGATACCCGGTCCCTTCAAGATGCTCAGTACTTCAAGAAAAATTTTGGTCACCAGCATGACTATCAGACCCCATGTTCTGGAAAGCTGGTTGAAAAGGTTGCGGGCTCATCTAGGAGCTTCATTGAGCCAAAGCCGCAAAAGGCCATTACCAGGCCAATTGAAAAGTTCCAAACAGAAGTGTTGCCTCCAAAATCAGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCCCCCATCAAGAGTCCCAGCTTTGTTCCCACCAATAATGCTGCATATATAATGGAGGCTGCGGCAAGAATTATTGAGCCTGGTTCCCAAGCTGGTAACAGGGCTAAGACACCTCTGGTAGCTTCATCAGCACCACTGAGAGTGAGAGAACTAAAAGATAAGGTGGAGGCTTCACAAAAGGGACCTCTAATTAGGCCATCCTCCATGACCTCTAGAACTCGAGATCTAAAAGAGAAAAGAGAACTTTCTCAAAGAATGGCCAGGCTTTCCGTATCTTGTCAAAGATCGGTCGAGTCAAATGCTGCCAAGTATCTCAAAGGACAATCTTTAAACAGAAGCTGGAATGGATCTGTGGATATGTCCATCAAATCTCCTACACACGAGGAAGAAGTTTCTTCTCTGAAGAATAATAAGGGGAAGTCCATTTCGCTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTGCGACTGGTGGAAGAAGTATGACGGCCCAGAAAGAGAATCCTGACTTGAAATCCAACCAACCAATGAAGGGAAGCGTGCAGAAAAATTTTCACAAGAANCTTATATTTCTACTAATTTTTCTCTACTTTTAA 1212 0.429 MGVEKEGTKGGGGYVGGFFQLFDWTSKSRKKLFAAKPDLPETLKQGRRVDYNVAMPMTQSSYLVDEDESGVGASLRGSCDHSYASSVTDDETFGTRAPSVVARLMGLDSLPSSSFSDPYATPYFDTRSLQDAQYFKKNFGHQHDYQTPCSGKLVEKVAGSSRSFIEPKPQKAITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKSPSFVPTNNAAYIMEAAARIIEPGSQAGNRAKTPLVASSAPLRVRELKDKVEASQKGPLIRPSSMTSRTRDLKEKRELSQRMARLSVSCQRSVESNAAKYLKGQSLNRSWNGSVDMSIKSPTHEEEVSSLKNNKGKSISLAIQAKVNVQRREGLSATGGRSMTAQKENPDLKSNQPMKGSVQKNFHKXLIFLLIFLYF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium362g00023 403 MobiDBLite consensus disorder prediction 359 384 - -
Vium362g00023 403 MobiDBLite consensus disorder prediction 356 384 - -
Vium362g00023 403 Pfam DUF761-associated sequence motif 85 116 IPR032795 -
Vium362g00023 403 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium362g00023 Vium-Chr362 175638 178345 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium362g00023 16 261 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 41.833 1.18e-42 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium362g00023 - - vum:124836694 742.651