Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium362g00022 ATGGGAGTTGAAAAAGAAGGGACGAAAGGTGGAGGAGGTTATGTTGGTGGTTTTTTCCAGTTGTTTGACTGGACGTCGAAGTCCCGTAAGAAATTATTTGCGGCCAAGCCAGATTTGCCTGAGACTTTAAAACAGGGAAGAAGAGTTGATTACAATGTGGCAATGCCAATGACACAGTCCTCCTATCTGGTTGATGAAGATGAAAGTGGTGTTGGGGCAAGTCTAAGAGGAAGTTGTGATCATAGTTATGCTTCATCTGTTACAGATGATGAAACATTTGGTACAAGGGCTCCTAGTGTTGTTGCCAGGCTTATGGGATTAGATTCCTTGCCTTCTTCAAGTTTTTCTGATCCTTATGCTACCCCATATTTTGATACCCGGTCCCTTCAAGATGCTCAGTACTTCAAGAAAAATTTTGGTCACCAGCATGACTATCAGACCCCATGTTCTGGAAAGCTGGTTGAAAAGGTTGCGGGCTCATCTAGGAGCTTCATTGAGCCAAAGCCGCAAAAGGCCATTACCAGGCCAATTGAAAAGTTCCAAACAGAAGTGTTGCCTCCAAAATCAGCTAAATCAATTCCTGTTACACACCATAAACTTTTGTCCCCCATCAAGAGTCCCAGCTTTGTTCCCACCAATAATGCTGCATATATAATGGAGGCTGCGGCAAGAATTATTGAGCCTGGTTCCCAAGCTGGTAACAGGGCTAAGACACCTCTGGTAGCTTCATCAGCACCACTGAGAGTGAGAGAACTAAAAGATAAGGTGGAGGCTTCACAAAAGGGACCTCTAATTAGGCCATCCTCCATGACCTCTAGAACTCGAGATCTAAAAGAGAAAAGAGAACTTTCTCAAAGAATGGCCAGGCTTTCCGTATCTTGTCAAAGATCGGTCGAGTCAAATGCTGCCAAGTATCTCAAAGGACAATCTTTAAACAGAAGCTGGAATGGATCTGTGGATATGTCCATCAAATCTCCTACACACGAGGAAGAAGTTTCTTCTCTGAAGAATAATAAGGGGAAGTCCATTTCGCTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTGCGACTGGTGGAAGAAGTATGACGGCCCAGAAAGAGAATCCTGACTTGAAATCCAACCAACCAATGAAGGGAAGCGTGCAGAAAAATTTTCACAAGAATTCTTCTACTCAGAATTCATCTGGTGCTCTCAGACAGAATAATCTGAAACAGAATTATTCTACTGACAAAGACAAATTACCATCAAAGCCATTGACGACCAATTCCCACAGTAGAAAAGTTCTGACTGGGGATTCCCCTTACGGACGTCATAGAAGCTCCAGTAATAAATCCATTGCAAAATCTAGAGTTGGATCCAGAAAGTCAGCTATGGAGGTGACTGATAGTGAAAAGGAAGTCTTATACACCAGCACAAACAATTTTCCTAGAAAGAAAAGGTCTACAGACAAGGACTGGAATGATAGGGTTGTGGACAATTTGTTCATTGAAAAAACTCAAAACCCTGCTAAGTCTAACCTAGTGAGTAATAAACAAAATAGTTGGGCTGAAGATGTAAAAAAGAAAGACATGGATGTAGTTTCATTCACATTCACCACACCATTAACTAGGAGCAATCCAGGTTTTGAGACATCTGGAAAAGCTGCCCAAAATACTAATGGTCTTTCCCTGGATCAACGCATTAAAAGGGTGTTGCTTGACCCAGACAATACAAGGTCCCCAATAGGATACAATTTGATTGGTGGTGGAGATGCCTTGGGTGTCCTTTTGGAACAGAAATTGAGAGAATTAACATGTATGGGAACAATTTGTCATGACTCTTCTAAAGTGAAGCAGCCTACTGTATCAGATGATCAAGTAACCGGCTTGAATGTAGTTAACCTCAATCCAATGTTCCAACAGAAAAAAGACCAAGATGTATTCTTTACAGACAAGTTAAGCAACAACTATGATTCAGACATCTCCTTCAGGGGTCTTCCTGAATTATCATTGAAGCAGAACTCATGGATTGATGAGATGGAACCACAGTTACTCAATTGCAGACACCCAAGTCCAATCTCTGTTCTCGAGCCTTCTTTTTCAATTGAAAGCTGTGAATCTTCATTGAGCACAGATGTTACTAGTACAGAAGGAAGCAAGTTGTGGTCATCTGTTCAAGCTCAAGAAGTTCAAGGCTTGAATTTTTCAAGGAAGTTCTATGCTTGTGAAACTGATGCTGAGTTATCCGATTCCGCTTCTTCAACCTCAGCTGGGAATATGATGAAGCACACAAGTAGTGTCACAAGGTTTGGTAGTAGCTCAAGGACGTGGGAGTTGGATTATGTGAAAGATATATTGAGTAATGTTGATTTGATGTATATGGATATTTCCCTTGGCCATGCTAGTGATGTTATAAATTCTCATCTATTCAAACAGTTGGAAGGCCGGAAGGGAGGGTTTAAGTGTGATGAGGAGTCTAGGATAAGAAGGAAAGTTACATTTGATTGTGTGAGTGAATGTTTGGACTTGAGATGCAGGCGTTATGTAGGTGGAGGATTCAAAATGTGGACCAAAGGGCTTGAAATGGTGAAAAGAAAAGAATGGTTGGCAGAAGACGTGTACAAGGAGATCTCATGTTGGAGAGGAATGGGAGACTCAATGGTGGATGAGCTTGTGGACAAGGACATGAGCAGCCAGTATGGAAGATGGCTAGATTATGAGGTTGATGCCTCTGAACTCGGATCAGAGGTTGTGGACCAAATATTTAATTCTTTGGTTGATGATGTTGTCACTGAAATCTTGCAATTGTAA 2805 0.4164 MGVEKEGTKGGGGYVGGFFQLFDWTSKSRKKLFAAKPDLPETLKQGRRVDYNVAMPMTQSSYLVDEDESGVGASLRGSCDHSYASSVTDDETFGTRAPSVVARLMGLDSLPSSSFSDPYATPYFDTRSLQDAQYFKKNFGHQHDYQTPCSGKLVEKVAGSSRSFIEPKPQKAITRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKSPSFVPTNNAAYIMEAAARIIEPGSQAGNRAKTPLVASSAPLRVRELKDKVEASQKGPLIRPSSMTSRTRDLKEKRELSQRMARLSVSCQRSVESNAAKYLKGQSLNRSWNGSVDMSIKSPTHEEEVSSLKNNKGKSISLAIQAKVNVQRREGLSATGGRSMTAQKENPDLKSNQPMKGSVQKNFHKNSSTQNSSGALRQNNLKQNYSTDKDKLPSKPLTTNSHSRKVLTGDSPYGRHRSSSNKSIAKSRVGSRKSAMEVTDSEKEVLYTSTNNFPRKKRSTDKDWNDRVVDNLFIEKTQNPAKSNLVSNKQNSWAEDVKKKDMDVVSFTFTTPLTRSNPGFETSGKAAQNTNGLSLDQRIKRVLLDPDNTRSPIGYNLIGGGDALGVLLEQKLRELTCMGTICHDSSKVKQPTVSDDQVTGLNVVNLNPMFQQKKDQDVFFTDKLSNNYDSDISFRGLPELSLKQNSWIDEMEPQLLNCRHPSPISVLEPSFSIESCESSLSTDVTSTEGSKLWSSVQAQEVQGLNFSRKFYACETDAELSDSASSTSAGNMMKHTSSVTRFGSSSRTWELDYVKDILSNVDLMYMDISLGHASDVINSHLFKQLEGRKGGFKCDEESRIRRKVTFDCVSECLDLRCRRYVGGGFKMWTKGLEMVKRKEWLAEDVYKEISCWRGMGDSMVDELVDKDMSSQYGRWLDYEVDASELGSEVVDQIFNSLVDDVVTEILQL 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium362g00022 934 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 930 - -
Vium362g00022 934 MobiDBLite consensus disorder prediction 255 284 - -
Vium362g00022 934 MobiDBLite consensus disorder prediction 359 455 - -
Vium362g00022 934 Pfam DUF761-associated sequence motif 85 116 IPR032795 -
Vium362g00022 934 MobiDBLite consensus disorder prediction 357 468 - -
Vium362g00022 934 Pfam Domain of unknown function (DUF4378) 776 926 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium362g00022 Vium-Chr362 168578 173980 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium362g00022 16 932 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 29.799 4.97e-88 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium362g00022 - - gmx:102669513 1507.27