Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium362g00012 ATGATTGTAGAGATGGCGAAGTCTAAGAATCACACAGCTCATAACCAGTCCTACAAGGCCCACAAAAATGGCATCAAGAAGCCCAAGAGGCATCGCCACACTTCCACCAAAGGGATGGACCCCAAGTTTCTGAGGAATCAGAGGTACGCTAGGAAGCACAACAAGAAGGATGGTGAAACTGCTTCCGAGGAAGAGTAA 198 0.4798 MIVEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKDGETASEEE 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium362g00012 65 PANTHER 60S RIBOSOMAL PROTEIN L29 5 62 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vium362g00012 65 Gene3D - 5 65 - -
Vium362g00012 65 MobiDBLite consensus disorder prediction 14 36 - -
Vium362g00012 65 MobiDBLite consensus disorder prediction 44 65 - -
Vium362g00012 65 MobiDBLite consensus disorder prediction 1 65 - -
Vium362g00012 65 Pfam Ribosomal L29e protein family 7 46 IPR002673 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium362g00012 Vium-Chr362 81127 81682 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium362g00012 5 65 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 86.885 7.03e-34 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium362g00012 K02905 - gmx:100803210 128.642