Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium362g00011 ATGGCGAAGTCTAAGAATCACACAGCTCATAACCAGTCCTACAAGGCCCACAAAAATGGCATCAAGAAGCCCAAGAGGCATCGCCACACTTCCACCAAAGGGATGGACCCCAAGTTTCTGAGGAATCAGAGGTACGCTAGGAAGCACAACAAGAAGGATGGTGAAACTGCTTCCGAGGAAGAGTAA 186 0.4892 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKDGETASEEE 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium362g00011 61 MobiDBLite consensus disorder prediction 1 61 - -
Vium362g00011 61 MobiDBLite consensus disorder prediction 40 61 - -
Vium362g00011 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vium362g00011 61 Gene3D - 1 61 - -
Vium362g00011 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 59 IPR002673 GO:0003735|GO:0005840|GO:0006412
Vium362g00011 61 MobiDBLite consensus disorder prediction 1 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium362g00011 Vium-Chr362 81127 81913 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium362g00011 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 86.885 6.41e-34 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium362g00011 K02905 - gmx:100803210 128.642