Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3616g00004 ATGGCGTCCTTGCATCATCCCACCGCTTCCCTCCAATCCAAACACGTCCTAATTCCCGGAAAGTCCCTTGCCCAGAAACCCACGCTCACCGTCTCCTTCCCCCGCTCCACCTTCTCCGCTCTCAAGCTCAAGCTCGCCGCCGCTACCCGCCGCTCCAACGGCGCCGCGGGCGCCAGAATGTCGGCCACGGTGTCCTCCAGCTACGCCTCGGCCCTGGCTGACGTGGCGAGCGCCAACAACACGCTGGACGTCACCGCCGCCGACATCGAGAAAGTCAGCGAGCTGTTCTCGGACCCGACGGTGTCGGACTTCTTCGCGGACCCCACGCTGGACGTGAAGAAGAAGCGGCAGCTGGTGGACGAAATCGCCGAGTCCTCGGGGTTCCAACCGCACACCAGAAACTTCCTCTACATCCTGGTGGACGCGCAGAGGATCGATCTAATTAACGAGATAGCGAGGGAGTTCGAATTGGTGTATAACAAGTTGACCGAGACGGAGCTGGCGGTGGTGACTTCGGTGGTGAAGTTGGAGTCCCAGCACCTGGCGCAAATCGCGAAGCAGGTTCAGAAGCTTACTGGGGCCAAAAACGTCAGGATCAAGACCCTCCTTGACCCTGGTTTGGTGGCCGGTTTCACTGTGAGGTACGGCAATTCTGGCTCCAAGTTGATTGACATGAGCGTCAGGAAGCAGCTTGAGGACATTGCTGCTCAGCTTGAGTTGAGTGATATCACACTCGCCGTATAG 744 0.5901 MASLHHPTASLQSKHVLIPGKSLAQKPTLTVSFPRSTFSALKLKLAAATRRSNGAAGARMSATVSSSYASALADVASANNTLDVTAADIEKVSELFSDPTVSDFFADPTLDVKKKRQLVDEIAESSGFQPHTRNFLYILVDAQRIDLINEIAREFELVYNKLTETELAVVTSVVKLESQHLAQIAKQVQKLTGAKNVRIKTLLDPGLVAGFTVRYGNSGSKLIDMSVRKQLEDIAAQLELSDITLAV 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3616g00004 247 Pfam ATP synthase delta (OSCP) subunit 64 238 IPR000711 GO:0015986|GO:0046933
Vium3616g00004 247 PANTHER ATP SYNTHASE DELTA CHAIN 44 239 IPR000711 GO:0015986|GO:0046933
Vium3616g00004 247 NCBIfam ATP synthase F1 subunit delta 64 238 IPR000711 GO:0015986|GO:0046933
Vium3616g00004 247 SUPERFAMILY N-terminal domain of the delta subunit of the F1F0-ATP synthase 61 163 IPR026015 -
Vium3616g00004 247 Hamap ATP synthase subunit delta [atpD]. 60 240 IPR000711 GO:0015986|GO:0046933
Vium3616g00004 247 Gene3D - 63 156 IPR026015 -
Vium3616g00004 247 PRINTS ATP synthase delta subunit signature 144 158 IPR000711 GO:0015986|GO:0046933
Vium3616g00004 247 PRINTS ATP synthase delta subunit signature 64 83 IPR000711 GO:0015986|GO:0046933
Vium3616g00004 247 PRINTS ATP synthase delta subunit signature 133 144 IPR000711 GO:0015986|GO:0046933
Vium3616g00004 247 PRINTS ATP synthase delta subunit signature 213 231 IPR000711 GO:0015986|GO:0046933
Vium3616g00004 247 PRINTS ATP synthase delta subunit signature 195 210 IPR000711 GO:0015986|GO:0046933
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3616g00004 1 246 Primary Pumps ATPases AT4G09650 59.761 6.90e-98 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3616g00004 K02113 - gmx:100819224 374.015