Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3594g00037 ATGACCCCTCTCTTATCCTCTTTCTCCCTCACCGACATAGCCTCCTACCTCGTATGCTTCCTCCTCCTCCTCATTCTCCTCGAACAGATCTCCTACCTTGCCAAGAAGGCTTCCATCCCAGGACCCTCCTTCGTCGTCCCCTTCCTTGGAAACGCAATCCCATTGGTCCGCAATCCAACCAACTTCTGGGACCTTCAGTCCTCTCTGGCAAAGTCCACCCCTTTGGGCTTCTCCGCCAACTACATAATCGGCAACTTCATCGTTTTCATCAGAGACACCGAACTCTCCCACAAGGTCTTCGCCAATGTCAGGCCCAACGCTTTCCACCTGGTGGGCCACCCCTTCGGCAAGAAGCTATTCGGCGAACACAACCTTATCTACATGATGGGTCAAGAACACAAGAATCTCCGCCGTCGCATCGCCCCCAACTTCACCCCCAAAGCCCTCTCCACCTACACCTCGCTCCAGCAGATTATCATCCTCGATCACCTCAAGTCCTGGGTTGCCAAAGCTCAAGCCCAAACCGATTCCATTCCGCTCCGTATTCTGGCCCGTGACATGAATCTCGACACCTCCCAGACCGTCTTCGTGGGCCCCTACTTGGGCCTCAAAGCCAGAGAGCGCTTCGAGAGGGATTACTTTCTATTCAACGTTGGCCTTATGAAGCTTCCGTTTGATTTCCCCGGCACCGCGTTTCGAAACGCGAGGCTCGCCGTGGACCGGCTCATCGAAACGCTGGCCACCTGCACCGAGATGAGCAAAACCAGGATGCAGAAAAGGGAAGAGCCTTCGTGTCTGATTGATTACTGGATGCAGGAAACGCTCAGGGAAATCGAGGAGGCCAAGCTCACCGAAGAGCCGGCGGCACCGTTCTCCACCGACGCCGAGATTGGTGGTTACCTCTTTGATTTTCTCTTTGCGTCGCAGGACGCGTCCACTTCGTCGCTGCTGTGGGCGGTGGCACTGCTGGATTCGCATCCGGAGGTGCTGGCGAAGGTTAGGGCAGAGGTGGCAGGAGTCTGGTCGCCGGAGTCGGACGAGCTGATTACCGCGGAGATGCTCCGGGAGATGAAGTATACGCAGGCGGTGGCTCGTGAGGTAGTGAGGTTCCGGCCGCCGGCGACGCTGGTGCCGCATATCGCGGCGGAGAGGTTCGCGCTGACGGAGTCGTACACGATACCGAAGGGGGCGATCGTGTTCCCGTCGGCATTCGAGTCGTCGTTTCAGGGGTTCAGTGAACCGGAGCGGTTCGACCCGGAGCGGTTCTCGGAGGAGAGACAGGAGGACCAAGTATTTAAAAGAAACTTTCTGGCCTTCGGTGCGGGGCCCCACCAGTGTGTGGGTCAAAGGTACGCATTGAATCATCTCGTTCTCTTCATCGCGTTGTTCACCACGTTGATCAATTTCAAGAGGGACAGAACGGACGGTTGCGATGAGATCGCGTACGTACCCACCATATGCCCTAAAGACGATTGCAGGGTGTTTCTCTCGCAACGCTGCACACGATATCCTTCCTTCCCTGCAGTCGATGACCTGATGAAATGA 1545 0.5644 MTPLLSSFSLTDIASYLVCFLLLLILLEQISYLAKKASIPGPSFVVPFLGNAIPLVRNPTNFWDLQSSLAKSTPLGFSANYIIGNFIVFIRDTELSHKVFANVRPNAFHLVGHPFGKKLFGEHNLIYMMGQEHKNLRRRIAPNFTPKALSTYTSLQQIIILDHLKSWVAKAQAQTDSIPLRILARDMNLDTSQTVFVGPYLGLKARERFERDYFLFNVGLMKLPFDFPGTAFRNARLAVDRLIETLATCTEMSKTRMQKREEPSCLIDYWMQETLREIEEAKLTEEPAAPFSTDAEIGGYLFDFLFASQDASTSSLLWAVALLDSHPEVLAKVRAEVAGVWSPESDELITAEMLREMKYTQAVAREVVRFRPPATLVPHIAAERFALTESYTIPKGAIVFPSAFESSFQGFSEPERFDPERFSEERQEDQVFKRNFLAFGAGPHQCVGQRYALNHLVLFIALFTTLINFKRDRTDGCDEIAYVPTICPKDDCRVFLSQRCTRYPSFPAVDDLMK 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3594g00037 514 PANTHER CYTOCHROME P450 26 39 465 - -
Vium3594g00037 514 FunFam Cytochrome P450 61 29 499 - -
Vium3594g00037 514 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 PRINTS E-class P450 group I signature 446 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 PRINTS E-class P450 group I signature 436 446 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 SUPERFAMILY Cytochrome P450 35 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 Pfam Cytochrome P450 41 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 PRINTS P450 superfamily signature 446 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 PRINTS P450 superfamily signature 437 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 CDD CYP61_CYP710 76 492 - -
Vium3594g00037 514 Gene3D Cytochrome P450 32 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3594g00037 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 439 448 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3594g00037 Vium-Chr3594 257760 260057 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3594g00037 13 506 Cytochrome P450 AT2G34500 66.397 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3594g00037 K09832 - gmx:100808148 915.22