Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3594g00006 ATGAGGCGAAACTGCAACTTGGAACTTGCCCTTTTCCCTCCCTCCGATTCTGACCCTCTCCACCACTCCAGGGTTCAAGGAGCTACGGAAACCAGTCCGCTCCATCACCACCACCGCCAGGAACACCAACAACAACCACTCACAATTTTCTACGACGGCAAGATTTGTGTTGCAGATGTCACCGAGCTTCAGGCTAAATCTATTTTAATGCTTGCAAATGGAAAATTGGAAGAAAGAACGAGGACAGGAAATGGGTCAGAGGCATCTTCTCCAACAGTTTTGCAATCTCCTAATCAATTGTATAGCCCTGGCAGTGGCCTTTCTATGAGAAAATCGTTGCAACGCTTCCTTCTCAAGAGAAAGAATCGGGTTCAAGAAGCCTCTCCATATCATCACTAG 399 0.4712 MRRNCNLELALFPPSDSDPLHHSRVQGATETSPLHHHHRQEHQQQPLTIFYDGKICVADVTELQAKSILMLANGKLEERTRTGNGSEASSPTVLQSPNQLYSPGSGLSMRKSLQRFLLKRKNRVQEASPYHH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3594g00006 132 MobiDBLite consensus disorder prediction 12 45 - -
Vium3594g00006 132 ProSiteProfiles Tify domain profile. 40 74 IPR010399 -
Vium3594g00006 132 Pfam tify domain 43 73 IPR010399 -
Vium3594g00006 132 SMART tify_2 40 74 IPR010399 -
Vium3594g00006 132 MobiDBLite consensus disorder prediction 83 106 - -
Vium3594g00006 132 Pfam Jas motif 110 130 IPR018467 -
Vium3594g00006 132 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 28 130 IPR040390 -
Vium3594g00006 132 MobiDBLite consensus disorder prediction 76 106 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3594g00006 1 131 Tify Gene Family AT1G30135 41.353 9.44e-24 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Vium3594g00006 tify 7.7e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3594g00006 - - gmx:100500349 201.83