Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3553g00001 ATGGCTACTCAAAACACACCCTTCGATCTTATCATGAAAGAAGTTGTTCTTATCAAACCATCAAAACCAACACCTTCCTCTATTCTTCCTTTATCTACACTGGACAACATACCTGTCCTTTATAGCCCATGCCACACCCTTCATGTATTTCAATCAAAAACTCATGATCTTGATGAACCTGGTTGCCCTAATCACCAACTGCTAGATCCTGCTAATATGATTAAAGCAGCAATTTCAAAGGCTTTATTCTATTATTATCCTCTAGCAGGTAGGCTAGTAAAGCACACTGATGGAAACTTCATGATCAACTGCAGTGCAGAAGGTGTTCCGTTCTTGGAAGCCAGTGCCAGTTGCAATCTTTCTTCTCTCCATTGCTTGGATGGCACTGACATGGAAAATTCTAAACACTTAGTGTTTGACCTTCCTTCTCAAAGTGAAAGTGGCTACCAATATCCCTTGGTGTTCAAGGTGACAACCTTTACTTGTGGGGGGTTCACCATTGGAATGGGGCTGTTACATACTCTTGGTGATGGCTTTGGAGCATCTCAGATCTTGAAAGCCATCATTGAGCTTGCAAGGGGGGAAAGTGAGCCCTCTGTGAAGCCTGTGTGGGAGAGAGAGAGGCTGAAGGGATCAATCACTAAACAGCCATTGCTATTTGATTCAGTGGATGAGGCCTCAGCTGCTGTTTCACCCTTTCTTCCAACCGAAATTCTCGTGCAGGAATGCATTAAGGTTAACAGTGACAGCATCAGTAGACTGAAG 765 0.4353 MATQNTPFDLIMKEVVLIKPSKPTPSSILPLSTLDNIPVLYSPCHTLHVFQSKTHDLDEPGCPNHQLLDPANMIKAAISKALFYYYPLAGRLVKHTDGNFMINCSAEGVPFLEASASCNLSSLHCLDGTDMENSKHLVFDLPSQSESGYQYPLVFKVTTFTCGGFTIGMGLLHTLGDGFGASQILKAIIELARGESEPSVKPVWERERLKGSITKQPLLFDSVDEASAAVSPFLPTEILVQECIKVNSDSISRLK 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3553g00001 255 Pfam Transferase family 15 255 - -
Vium3553g00001 255 Gene3D - 8 219 IPR023213 -
Vium3553g00001 255 PANTHER ACYL TRANSFERASE 4 12 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3553g00001 Vium-Chr3553 6463 7259 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3553g00001 12 217 Monolignol Biosynthesis Gene Families AT5G48930 28.846 5.86e-18 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3553g00001 K20240 - gmx:100801843 280.411