Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3551g00001 ATGAGCATCCCTGCAACAGTTTCTAGAGTCTTGAAATACATACCTGAACTACAACAGCAAGTTCAAGCACTAACAAAAAGAAAAGAGGAGCTTCTAGGCAGAATTTCTCGGCAATTGCAAGGAGATGCAGTGAACAAAGAATCTCAAAGGAAAATTTCCCACCACAACTCTTCTTTTGTTGTCTCAACAACTAGGCTTAACGAATGTGAAGCTGTAGTTCACATTTCATGTCATGAGACCCACAAGGCTCCACTATCAGAGATCCTGCAGTGTTTAGAAAATGATGGTCTTTTTCTGCTAGATGCTTCTTCCTCAGAAACCTTTGGAGGAAGGTTCTTCTACAATTTGCATTTTCAGGTGGAGAAAACTAATAGATTAGAGCCCGAGATATTAACAGAGAAGCTTTTACCAATATATGAGAAGCAAAGGATTTTCTAA 438 0.3904 MSIPATVSRVLKYIPELQQQVQALTKRKEELLGRISRQLQGDAVNKESQRKISHHNSSFVVSTTRLNECEAVVHISCHETHKAPLSEILQCLENDGLFLLDASSSETFGGRFFYNLHFQVEKTNRLEPEILTEKLLPIYEKQRIF 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3551g00001 145 Coils Coil 14 34 - -
Vium3551g00001 145 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 2 134 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3551g00001 1 141 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 43.357 4.44e-32 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3551g00001 - - vum:124834837 288.5