Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vium3550g00021 ATGGATTGGTTCCTAAAATCATCGGAAGCCATGTCCAACCTTAATCCATTCAACATCACCATCTTACTCATCCTCCCACTAACAACACTTCTTTTCGTTTTGCTACATCGTACTCGTCCAAGAGCACCGTATCCACCGGGACCAAAGGGTTTGCCCATCATAGGAAACATGTTGATGATGGACCAGTTAACCCACCGCGGTCTTGCCACCCTCGCCAAGCAATTCGGCGGCGTTTTCCACCTCCGCATGGGCTTCCTCCACATGATAGCCATCTCCGACCCCGACGCGGCACGTCAGGTTCTCCAAGTCCAAGATAATATCTTCTCCAATCGCCCCGCCACCATCGCCATCAGCTACCTCACCTACGACCGCGCCGACATGGCCTTCGCACACTACGGCCCCTTCTGGCGCCAGATGCGCAAGCTCTGCGTCATGAAACTCTTCAGCCGAAAGCGCGCCGAGTCCTGGCAATCCGTGCGCGACGAGGTCGACGGTGCAGTCCGCTCCGTCGCGGCTTCCGCCGGAAAAGCCATCAACGTCGGCGAGCTCGTGTTCAACCTGACGAAAAACATCATCTACCGTGCGGCCTTTGGGTCGAGCTCCCAGGAGGGACAGGAAGAGTTCATTGGGATTCTGCAGGAGTTTTCGAAACTCTTTGGCGCTTTCAACATCGCGGATTTTATACCCTACCTCGGGCGCGTGGACCCGCAGGGGCTCAACGCGCGCCTTGCTAGGGCTCGCGGCGCGTTGGATAGCTTCATAGATAAGATCATTGATGAGCACGTAGAGAAGAAGAAGAATGGGAAGGGTGTCTGTGATGGAGAAGCGGACATGGTGGATGAGTTGCTCGCGTTCTACACCGAAGAGGCCAAGTTGAACAATGAACCTGAAGATTTGCAGAACTCTATCAGACTCACTAAGGATAACATCAAAGCTATCATTATGGTATCTATGGATCCCTTTTTATTTATTTTTTTATAA 981 0.528 MDWFLKSSEAMSNLNPFNITILLILPLTTLLFVLLHRTRPRAPYPPGPKGLPIIGNMLMMDQLTHRGLATLAKQFGGVFHLRMGFLHMIAISDPDAARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDGAVRSVAASAGKAINVGELVFNLTKNIIYRAAFGSSSQEGQEEFIGILQEFSKLFGAFNIADFIPYLGRVDPQGLNARLARARGALDSFIDKIIDEHVEKKKNGKGVCDGEADMVDELLAFYTEEAKLNNEPEDLQNSIRLTKDNIKAIIMVSMDPFLFIFL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vium3550g00021 326 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3550g00021 326 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3550g00021 326 PRINTS E-class P450 group I signature 187 205 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3550g00021 326 Gene3D Cytochrome P450 37 319 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3550g00021 326 Pfam Cytochrome P450 45 315 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vium3550g00021 326 PANTHER CYTOCHROME P450 84A1-RELATED 18 318 - -
Vium3550g00021 326 SUPERFAMILY Cytochrome P450 38 316 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vium3550g00021 Vium-Chr3550 230196 231294 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vium3550g00021 52 318 Monolignol Biosynthesis Gene Families AT4G36220 74.074 3.11e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vium3550g00021 K09755 - gmx:100783430 494.967